BLASTX nr result

ID: Cimicifuga21_contig00040279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040279
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]    83   2e-14
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    80   2e-13
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    78   8e-13
emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]    78   8e-13
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                     77   1e-12

>emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]
          Length = 424

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/101 (39%), Positives = 60/101 (59%)
 Frame = +1

Query: 19  NMLYFAPFTGNNSVVLGNGNFLGIKNIGHIPITLGSHSFDLNHVYHVPEM*KNLISVAKF 198
           N+   +PF G + +++GNG+ L I + G   +T  SHSF L++V  VP M +NLIS+++F
Sbjct: 305 NLALHSPFDGTDEIMIGNGSGLPISHTGSTSLTTPSHSFTLSNVLWVPIMKRNLISISQF 364

Query: 199 ATDNNVGFYFTPQCYTIIDLSSGTCLFQGPCKDSLYPIPMS 321
              NN    F P  + + DL +G  L QG  KD +Y  P+S
Sbjct: 365 CKSNNTSIEFLPSSFHVKDLHTGAILLQGRTKDGVYEWPLS 405


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/101 (38%), Positives = 59/101 (58%)
 Frame = +1

Query: 19  NMLYFAPFTGNNSVVLGNGNFLGIKNIGHIPITLGSHSFDLNHVYHVPEM*KNLISVAKF 198
           N+   +PF G + +++G+G  L I + G   +T  SHSF L++V  VP M +NLIS+++F
Sbjct: 172 NLALHSPFDGTDEIMIGDGFGLPISHTGSTSLTTPSHSFTLSNVLCVPTMKRNLISISQF 231

Query: 199 ATDNNVGFYFTPQCYTIIDLSSGTCLFQGPCKDSLYPIPMS 321
              NN    F P  + + DL +G  L QG  KD +Y  P+S
Sbjct: 232 CKSNNTSIEFLPSSFHVKDLHTGAILLQGRTKDGVYEWPLS 272


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/100 (40%), Positives = 57/100 (57%)
 Frame = +1

Query: 19  NMLYFAPFTGNNSVVLGNGNFLGIKNIGHIPITLGSHSFDLNHVYHVPEM*KNLISVAKF 198
           N+   +P+TG + V +GNG  L I NIG   +   +HSF L  V+HVP +  NLISVAKF
Sbjct: 361 NLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVAKF 420

Query: 199 ATDNNVGFYFTPQCYTIIDLSSGTCLFQGPCKDSLYPIPM 318
            ++NN    F    + + DL +   L QG  ++ LY  P+
Sbjct: 421 CSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPV 460


>emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]
          Length = 1099

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/101 (36%), Positives = 61/101 (60%)
 Frame = +1

Query: 19  NMLYFAPFTGNNSVVLGNGNFLGIKNIGHIPITLGSHSFDLNHVYHVPEM*KNLISVAKF 198
           N+    P+ G++ +++G+G+ L I +IG   +    ++F LN+V  VP M KNLIS+++F
Sbjct: 408 NLSMHTPYNGSDDIMIGDGSGLSITHIGSSSLHTTHNTFKLNNVLCVPTMKKNLISISQF 467

Query: 199 ATDNNVGFYFTPQCYTIIDLSSGTCLFQGPCKDSLYPIPMS 321
            T NNV   F P  + + D+ + T L +G  KD +Y  P+S
Sbjct: 468 CTSNNVSIEFLPTAFLVKDIQTRTTLLKGNTKDGVYEWPIS 508


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/104 (36%), Positives = 59/104 (56%)
 Frame = +1

Query: 16  DNMLYFAPFTGNNSVVLGNGNFLGIKNIGHIPITLGSHSFDLNHVYHVPEM*KNLISVAK 195
           +N+ +  P+TG + V++ +G+ + I + G   +   S S DLN V +VP + KNLISV +
Sbjct: 344 NNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNINKNLISVYR 403

Query: 196 FATDNNVGFYFTPQCYTIIDLSSGTCLFQGPCKDSLYPIPMSQS 327
               N V   F P  + + DL++G  L QG  KD LY  P++ S
Sbjct: 404 LCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447


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