BLASTX nr result

ID: Cimicifuga21_contig00040276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040276
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78729.1| hypothetical protein VITISV_020013 [Vitis vinifera]    91   1e-16
ref|XP_002314887.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002524398.1| CLE12, putative [Ricinus communis] gi|223536...    78   7e-13
gb|ADW77258.1| CLE04 protein [Glycine max]                             75   6e-12
ref|XP_002312377.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12

>emb|CAN78729.1| hypothetical protein VITISV_020013 [Vitis vinifera]
          Length = 114

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 8/111 (7%)
 Frame = -2

Query: 309 MAL-RVSYRLGITLWLSLLLFMFHAGWCNFKPKN----QASTLLHRTLINRKVLASKFDF 145
           MAL R+S+ L + LWLS+LL   H  + N KP++     +S++  +  I+RKVL+SKFDF
Sbjct: 1   MALKRISHLLFVLLWLSILLLFLHE-YYNVKPRSISYYSSSSVSRQPPISRKVLSSKFDF 59

Query: 144 SPFQKXXXXXXXXXXXH---SSDVVLQPEPGENEIDPRYGVEKRLVPTGPN 1
           +PFQK               S ++ +QPEP   EIDPRYGVEKRLVPTGPN
Sbjct: 60  TPFQKQRHRHRHHHSHRHGRSPNMQVQPEPAGTEIDPRYGVEKRLVPTGPN 110


>ref|XP_002314887.1| predicted protein [Populus trichocarpa] gi|222863927|gb|EEF01058.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 55/122 (45%), Positives = 67/122 (54%), Gaps = 19/122 (15%)
 Frame = -2

Query: 309 MALRVSYRLGITLWLSLLLFMFHAGWCNFKPK-----------NQASTLLHRTLINRKVL 163
           MALR+ + L +  WLSLLL +FH   CNFK K           +++ST  +R  + RKV+
Sbjct: 1   MALRIFHTLCVVFWLSLLLLVFHE-LCNFKSKINSTKDQINNISKSSTFSYRPFLTRKVV 59

Query: 162 ASKFDFSPFQKXXXXXXXXXXXHSSDVVLQPEPGE--------NEIDPRYGVEKRLVPTG 7
           A KFDF+PFQK                  QP P E        +EIDPRYGVEKRLVPTG
Sbjct: 60  ARKFDFTPFQKHHQ---------------QPMPEEEGHKKRARSEIDPRYGVEKRLVPTG 104

Query: 6   PN 1
           PN
Sbjct: 105 PN 106


>ref|XP_002524398.1| CLE12, putative [Ricinus communis] gi|223536359|gb|EEF38009.1|
           CLE12, putative [Ricinus communis]
          Length = 118

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 51/114 (44%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
 Frame = -2

Query: 309 MALRVSYRLGITLWLSLLLFMFH------AGWCNFKP--KNQASTLLHRTLINRKVLASK 154
           MA ++S+ L + LWLSLLL +FH      +G  N K        ++  R+  NRKVLASK
Sbjct: 1   MASKISHTLCVVLWLSLLLLLFHELFHFKSGIINTKEIVSTTYPSIPRRSSFNRKVLASK 60

Query: 153 FDFSPFQKXXXXXXXXXXXHSSDVVLQP---EPGENEIDPRYGVEKRLVPTGPN 1
            DFSPFQK                  Q         EIDPRYGVEKRLVPTGPN
Sbjct: 61  IDFSPFQKKQQQNHHHPHYQDHHHEKQQVHRNGDGKEIDPRYGVEKRLVPTGPN 114


>gb|ADW77258.1| CLE04 protein [Glycine max]
          Length = 111

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
 Frame = -2

Query: 309 MALRVSYRLGITLWLSLLLFMFHAGWCNFKPK---------NQASTLLHRTLINRKVLAS 157
           MALR+S  + I L LSL+L +FH  + N K K         + +S   H   ++RK LA+
Sbjct: 1   MALRISQAVHILLLLSLILLVFHE-YYNLKSKINKKQITQTSHSSLPSHHHFMSRKFLAT 59

Query: 156 KFDFSPFQKXXXXXXXXXXXHSSDVVLQPEPGENEIDPRYGVEKRLVPTGPN 1
           KFDFSPF K            +    +  +P + +IDPRYGVEKR VPTGPN
Sbjct: 60  KFDFSPFFKLHHNHRKHQPGGA----VHHDPSDTQIDPRYGVEKRRVPTGPN 107


>ref|XP_002312377.1| predicted protein [Populus trichocarpa] gi|222852197|gb|EEE89744.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/113 (44%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
 Frame = -2

Query: 309 MALRVSYRLGITLWLSLLLFMFHAGWCNFKPKNQ----------ASTLLHRTLINRKVLA 160
           MAL++S+     L L LLL  FH    NFK K            +S++ H    NRKVL 
Sbjct: 1   MALKISHIPCALLCLYLLLLAFHE-LRNFKSKINNNKDQINNISSSSISHHPFHNRKVLV 59

Query: 159 SKFDFSPFQKXXXXXXXXXXXHSSDVVLQPEPGENEIDPRYGVEKRLVPTGPN 1
           SKFDF+PFQK              D  +  +   +EIDPRYGVEKRLVPTGPN
Sbjct: 60  SKFDFTPFQKHRQQQHENPLP---DEEVHKKAARSEIDPRYGVEKRLVPTGPN 109


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