BLASTX nr result

ID: Cimicifuga21_contig00040197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040197
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602662.1| Amino-acid permease, putative [Medicago trun...   197   7e-49
gb|AFW58287.1| amino acid permease [Zea mays]                         194   8e-48
ref|XP_002446506.1| hypothetical protein SORBIDRAFT_06g017100 [S...   194   8e-48
ref|NP_001148156.1| amino acid permease [Zea mays] gi|195616234|...   194   8e-48
ref|XP_002309938.1| amino acid transporter [Populus trichocarpa]...   191   4e-47

>ref|XP_003602662.1| Amino-acid permease, putative [Medicago truncatula]
           gi|358348396|ref|XP_003638233.1| Amino-acid permease,
           putative [Medicago truncatula]
           gi|355491710|gb|AES72913.1| Amino-acid permease,
           putative [Medicago truncatula]
           gi|355504168|gb|AES85371.1| Amino-acid permease,
           putative [Medicago truncatula]
          Length = 528

 Score =  197 bits (501), Expect = 7e-49
 Identities = 88/98 (89%), Positives = 95/98 (96%)
 Frame = +3

Query: 3   WRKIHPKHKVPTNAVWLCAAICVVLGLPILKLNVAFTAITSIATIGWVGGYAVPIFARMV 182
           WRK+HPKHKVPTNAVWLCAAIC++LGLPILK+NV FTAITSIATIGWVGGYAVPIFARMV
Sbjct: 381 WRKLHPKHKVPTNAVWLCAAICILLGLPILKVNVVFTAITSIATIGWVGGYAVPIFARMV 440

Query: 183 MNEKDFKPGPFYLGRASRPICLVAFLWICYTCSVFLLP 296
           M EK+FKPGPFYLG+ASRP CL+AFLWICYTCSVFLLP
Sbjct: 441 MPEKNFKPGPFYLGKASRPTCLIAFLWICYTCSVFLLP 478


>gb|AFW58287.1| amino acid permease [Zea mays]
          Length = 525

 Score =  194 bits (492), Expect = 8e-48
 Identities = 85/98 (86%), Positives = 93/98 (94%)
 Frame = +3

Query: 3   WRKIHPKHKVPTNAVWLCAAICVVLGLPILKLNVAFTAITSIATIGWVGGYAVPIFARMV 182
           WR+IHP+HKVP NAVWLCAA+C +LGLPIL++NV FTAITSIATIGWVGGYAVPIFARMV
Sbjct: 377 WRRIHPRHKVPANAVWLCAAVCTLLGLPILRINVVFTAITSIATIGWVGGYAVPIFARMV 436

Query: 183 MNEKDFKPGPFYLGRASRPICLVAFLWICYTCSVFLLP 296
           M E DF+PGPFYLGRASRP+CLVAFLWICYTCSVFLLP
Sbjct: 437 MREDDFRPGPFYLGRASRPVCLVAFLWICYTCSVFLLP 474


>ref|XP_002446506.1| hypothetical protein SORBIDRAFT_06g017100 [Sorghum bicolor]
           gi|241937689|gb|EES10834.1| hypothetical protein
           SORBIDRAFT_06g017100 [Sorghum bicolor]
          Length = 525

 Score =  194 bits (492), Expect = 8e-48
 Identities = 85/98 (86%), Positives = 93/98 (94%)
 Frame = +3

Query: 3   WRKIHPKHKVPTNAVWLCAAICVVLGLPILKLNVAFTAITSIATIGWVGGYAVPIFARMV 182
           WR+IHP+HKVP NAVWLCAA+C +LGLPIL++NV FTAITSIATIGWVGGYAVPIFARMV
Sbjct: 376 WRRIHPRHKVPANAVWLCAAVCALLGLPILRINVVFTAITSIATIGWVGGYAVPIFARMV 435

Query: 183 MNEKDFKPGPFYLGRASRPICLVAFLWICYTCSVFLLP 296
           M E DF+PGPFYLGRASRP+CLVAFLWICYTCSVFLLP
Sbjct: 436 MREDDFRPGPFYLGRASRPVCLVAFLWICYTCSVFLLP 473


>ref|NP_001148156.1| amino acid permease [Zea mays] gi|195616234|gb|ACG29947.1| amino
           acid permease [Zea mays]
          Length = 525

 Score =  194 bits (492), Expect = 8e-48
 Identities = 85/98 (86%), Positives = 93/98 (94%)
 Frame = +3

Query: 3   WRKIHPKHKVPTNAVWLCAAICVVLGLPILKLNVAFTAITSIATIGWVGGYAVPIFARMV 182
           WR+IHP+HKVP NAVWLCAA+C +LGLPIL++NV FTAITSIATIGWVGGYAVPIFARMV
Sbjct: 377 WRRIHPRHKVPANAVWLCAAVCTLLGLPILRINVVFTAITSIATIGWVGGYAVPIFARMV 436

Query: 183 MNEKDFKPGPFYLGRASRPICLVAFLWICYTCSVFLLP 296
           M E DF+PGPFYLGRASRP+CLVAFLWICYTCSVFLLP
Sbjct: 437 MREDDFRPGPFYLGRASRPVCLVAFLWICYTCSVFLLP 474


>ref|XP_002309938.1| amino acid transporter [Populus trichocarpa]
           gi|222852841|gb|EEE90388.1| amino acid transporter
           [Populus trichocarpa]
          Length = 538

 Score =  191 bits (486), Expect = 4e-47
 Identities = 84/98 (85%), Positives = 94/98 (95%)
 Frame = +3

Query: 3   WRKIHPKHKVPTNAVWLCAAICVVLGLPILKLNVAFTAITSIATIGWVGGYAVPIFARMV 182
           WRKIHPKHKVP+NAVWLCAAIC++LGLPILK+NV FTAITSI TIGWVGGYAVPIFAR+V
Sbjct: 391 WRKIHPKHKVPSNAVWLCAAICILLGLPILKVNVVFTAITSICTIGWVGGYAVPIFARIV 450

Query: 183 MNEKDFKPGPFYLGRASRPICLVAFLWICYTCSVFLLP 296
           M+EK+FK GPFYLGRA RP+C++AFLWICYTCSVFLLP
Sbjct: 451 MDEKNFKAGPFYLGRARRPVCIIAFLWICYTCSVFLLP 488


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