BLASTX nr result

ID: Cimicifuga21_contig00040183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040183
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]                         159   2e-37
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]   157   6e-37
ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
          Length = 514

 Score =  159 bits (403), Expect = 2e-37
 Identities = 73/95 (76%), Positives = 84/95 (88%)
 Frame = -2

Query: 313 LDGFVPAMELVLMDVSDEEKESCLNSHSEKLATVYGILKTSPGTDIRISKNLRICYDCHS 134
           L+GFVP+ ELV+MDVS+EEKE  L  HSEKLA  YGILKTSPGT+IRI KNLRICYDCH+
Sbjct: 420 LEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLRICYDCHN 479

Query: 133 WMKMVSRILNRVIVMRDRIRFHRFESGSCSCKDYW 29
           W+KMVS +L+RVI++RDRIRFHRFE GSCSC DYW
Sbjct: 480 WIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514


>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score =  157 bits (398), Expect = 6e-37
 Identities = 70/95 (73%), Positives = 85/95 (89%)
 Frame = -2

Query: 313 LDGFVPAMELVLMDVSDEEKESCLNSHSEKLATVYGILKTSPGTDIRISKNLRICYDCHS 134
           L+GF+PA +LVLMDVSDEE+E  LNSHSEKLA  Y ILKTSPGT+IR+SKNLR C+DCH 
Sbjct: 429 LEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHC 488

Query: 133 WMKMVSRILNRVIVMRDRIRFHRFESGSCSCKDYW 29
           WMK++SR+L+RVI++RDRIRFH+FE G CSC+DYW
Sbjct: 489 WMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 523


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score =  157 bits (398), Expect = 6e-37
 Identities = 70/95 (73%), Positives = 85/95 (89%)
 Frame = -2

Query: 313 LDGFVPAMELVLMDVSDEEKESCLNSHSEKLATVYGILKTSPGTDIRISKNLRICYDCHS 134
           L+GF+PA +LVLMDVSDEE+E  LNSHSEKLA  Y ILKTSPGT+IR+SKNLR C+DCH 
Sbjct: 468 LEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHC 527

Query: 133 WMKMVSRILNRVIVMRDRIRFHRFESGSCSCKDYW 29
           WMK++SR+L+RVI++RDRIRFH+FE G CSC+DYW
Sbjct: 528 WMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562


>ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Glycine max]
          Length = 569

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/95 (72%), Positives = 80/95 (84%)
 Frame = -2

Query: 313 LDGFVPAMELVLMDVSDEEKESCLNSHSEKLATVYGILKTSPGTDIRISKNLRICYDCHS 134
           L+GF P  +LVLMDVS+EEKE  L  HSEKLA  Y +LKTSPGT IRISKNLRIC DCH+
Sbjct: 475 LEGFTPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNLRICLDCHN 534

Query: 133 WMKMVSRILNRVIVMRDRIRFHRFESGSCSCKDYW 29
           W+K+VS+ILNR I++RDRIRFH+FE G CSCKDYW
Sbjct: 535 WIKIVSKILNRKIIVRDRIRFHQFEGGVCSCKDYW 569


>ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|222859457|gb|EEE97004.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  150 bits (379), Expect = 1e-34
 Identities = 68/95 (71%), Positives = 81/95 (85%)
 Frame = -2

Query: 313 LDGFVPAMELVLMDVSDEEKESCLNSHSEKLATVYGILKTSPGTDIRISKNLRICYDCHS 134
           L G+VP  +LV MDVS+EEKE  L  HSEKLA  YGILKT+ G ++RISKNLRICYDCHS
Sbjct: 417 LAGYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYDCHS 476

Query: 133 WMKMVSRILNRVIVMRDRIRFHRFESGSCSCKDYW 29
           W+K+VSR+L+RVI++RDRIRFHRFE+G CSC DYW
Sbjct: 477 WIKIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 511


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