BLASTX nr result

ID: Cimicifuga21_contig00040175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040175
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002263559.1| PREDICTED: LOB domain-containing protein 16 ...    65   6e-09
ref|XP_002306833.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-...    57   1e-06
ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-...    57   1e-06

>ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|222843783|gb|EEE81330.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
 Frame = -1

Query: 213 AFPS--TDMHSISPQSSMDSGDNNNTD----RLGLQDVYANDDVQFQSCSK-KMLYQNDL 55
           +FPS  T ++ ISPQSS+DS D NN++     + +QD+ + ++  FQSC+K K  Y +DL
Sbjct: 141 SFPSYQTYINPISPQSSLDSVDLNNSNIDHGMMDMQDIKSGEEFAFQSCAKVKRPYNSDL 200

Query: 54  GELQALALRMMRN 16
           GELQALALRMMRN
Sbjct: 201 GELQALALRMMRN 213


>ref|XP_002263559.1| PREDICTED: LOB domain-containing protein 16 [Vitis vinifera]
           gi|297744118|emb|CBI37088.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/60 (53%), Positives = 45/60 (75%)
 Frame = -1

Query: 195 MHSISPQSSMDSGDNNNTDRLGLQDVYANDDVQFQSCSKKMLYQNDLGELQALALRMMRN 16
           M+S+SPQ S++  D+N+ D + +QD+ + D+  FQ+CS+K    NDLGELQ LALRMMRN
Sbjct: 137 MNSVSPQCSLELIDHNS-DGMTMQDIQSRDEFSFQTCSRKRPPHNDLGELQELALRMMRN 195


>ref|XP_002306833.1| predicted protein [Populus trichocarpa] gi|222856282|gb|EEE93829.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
 Frame = -1

Query: 195 MHSISPQSSMDSGD--NNNTDR--LGLQDVYANDDVQFQSCSK-KMLYQNDLGELQALAL 31
           ++ ISPQSS+DS D  +NN DR  + +QD+ + ++  FQS +K K    +DLGELQALAL
Sbjct: 149 INPISPQSSLDSVDLISNNIDRGMMNMQDIQSREEFAFQSRAKVKRPCNSDLGELQALAL 208

Query: 30  RMMRN 16
           RMMRN
Sbjct: 209 RMMRN 213


>ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -1

Query: 210 FPSTDMHSISPQSSMDSGDNNN-TDRLGLQDVYANDDVQFQSCSKKMLYQNDLGELQALA 34
           F  T M+ ISPQSS++S D+++  D + +QD+ + +D Q Q+  ++    NDLGELQ LA
Sbjct: 149 FCPTYMNPISPQSSLESIDHSSINDGMSMQDIQSREDFQIQA-KERPYNNNDLGELQELA 207

Query: 33  LRMMRN 16
           LRMMRN
Sbjct: 208 LRMMRN 213


>ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -1

Query: 210 FPSTDMHSISPQSSMDSGDNNN-TDRLGLQDVYANDDVQFQSCSKKMLYQNDLGELQALA 34
           F  T M+ ISPQSS++S D+++  D + +QD+ + +D Q Q+  ++    NDLGELQ LA
Sbjct: 149 FCPTYMNPISPQSSLESIDHSSINDGMSMQDIQSREDFQIQA-KERPYNNNDLGELQELA 207

Query: 33  LRMMRN 16
           LRMMRN
Sbjct: 208 LRMMRN 213


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