BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040172
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40215.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_002530468.1| pentatricopeptide repeat-containing protein,...    80   2e-13
ref|XP_002976605.1| hypothetical protein SELMODRAFT_105472 [Sela...    67   1e-09
ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09

>emb|CBI40215.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/96 (53%), Positives = 69/96 (71%)
 Frame = +1

Query: 22  LLKCRNSSSICSTTRRLLQHFRSFCTSSLPIHRNHNNELYLCNTRIQGLGRHGKVDQARK 201
           +++ R +S+     RR L  FR   T SLPI       L+ CNTRIQ LGR G+V++AR+
Sbjct: 1   MIRWRTASTPYPVIRRFLCTFRCISTLSLPIQETPQTHLFQCNTRIQELGRLGRVEEARR 60

Query: 202 LFDEMLHRDSVTWNSMINGYSQNGRIDEAKSLFDSF 309
           +F+EM+ RD V+WNSMINGYSQNG++DEA+ LFD+F
Sbjct: 61  VFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF 96



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 21/49 (42%), Positives = 36/49 (73%)
 Frame = +1

Query: 157 IQGLGRHGKVDQARKLFDEMLHRDSVTWNSMINGYSQNGRIDEAKSLFD 303
           + G  + G++++AR++F+ M  R+ V+WN+MI+GY QNG +  A+ LFD
Sbjct: 108 LTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFD 156


>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = +1

Query: 136 LYLCNTRIQGLGRHGKVDQARKLFDEMLHRDSVTWNSMINGYSQNGRIDEAKSLFDSF 309
           L+ CNTRIQ LGR G+V++AR++F+EM+ RD V+WNSMINGYSQNG++DEA+ LFD+F
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF 228



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/53 (43%), Positives = 38/53 (71%)
 Frame = +1

Query: 148 NTRIQGLGRHGKVDQARKLFDEMLHRDSVTWNSMINGYSQNGRIDEAKSLFDS 306
           N+ I G  ++GKVD+AR LFD  + ++  TW  ++ GY++ GRI+EA+ +F+S
Sbjct: 206 NSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFES 258



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 21/49 (42%), Positives = 36/49 (73%)
 Frame = +1

Query: 157 IQGLGRHGKVDQARKLFDEMLHRDSVTWNSMINGYSQNGRIDEAKSLFD 303
           + G  + G++++AR++F+ M  R+ V+WN+MI+GY QNG +  A+ LFD
Sbjct: 240 LTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFD 288


>ref|XP_002530468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530013|gb|EEF31938.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 801

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
 Frame = +1

Query: 70  LLQHFRSFCTSSLPIH-----RNHNNELYLCNTRIQGLGRHGKVDQARKLFDEMLHRDSV 234
           ++ H  S C S++PI      RN    L+ CN +IQ LG+ G+V  AR LFD M  RD+V
Sbjct: 1   MICHRFSRCLSTVPISVSQTLRNPQAHLFQCNKKIQELGKLGRVKDARHLFDTMPQRDAV 60

Query: 235 TWNSMINGYSQNGRIDEAKSLFDSF 309
           +WNSMI+ Y QN +I +AKSLFD+F
Sbjct: 61  SWNSMISVYLQNNKIPDAKSLFDAF 85



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 21/50 (42%), Positives = 38/50 (76%)
 Frame = +1

Query: 151 TRIQGLGRHGKVDQARKLFDEMLHRDSVTWNSMINGYSQNGRIDEAKSLF 300
           T I     +G++D+A+ +FDE+++ + V WN+M+ GY+QNG ++EAK++F
Sbjct: 320 TIIAAYMHNGRIDEAKHIFDEIVNPNVVAWNAMLGGYAQNGMLEEAKAIF 369


>ref|XP_002976605.1| hypothetical protein SELMODRAFT_105472 [Selaginella moellendorffii]
           gi|300155643|gb|EFJ22274.1| hypothetical protein
           SELMODRAFT_105472 [Selaginella moellendorffii]
          Length = 614

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = +1

Query: 133 ELYLCNTRIQGLGRHGKVDQARKLFDEMLHRDSVTWNSMINGYSQNGRIDEAKSLFDS 306
           +L    + I G G  GK+DQAR+LF  M HRD+V WN+MI   ++NGRI+EA+  FDS
Sbjct: 227 DLMSITSMIAGYGSVGKIDQARELFSRMKHRDTVAWNAMIQALAENGRIEEARQAFDS 284


>ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 579

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/58 (55%), Positives = 40/58 (68%)
 Frame = +1

Query: 133 ELYLCNTRIQGLGRHGKVDQARKLFDEMLHRDSVTWNSMINGYSQNGRIDEAKSLFDS 306
           ++Y  N  I  L R GKVD ARKLFDEM  +D VTWNSM++ Y QNG +  +K+LF S
Sbjct: 28  DVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHS 85