BLASTX nr result

ID: Cimicifuga21_contig00040163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040163
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553726.1| PREDICTED: kinesin-4-like [Glycine max]           114   1e-23
ref|XP_003520811.1| PREDICTED: kinesin-4-like [Glycine max]           112   3e-23
ref|XP_002512378.1| Kinesin-3, putative [Ricinus communis] gi|22...   112   3e-23
ref|XP_003555602.1| PREDICTED: kinesin-4-like [Glycine max]           112   4e-23
ref|XP_002328454.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23

>ref|XP_003553726.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 759

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/119 (54%), Positives = 84/119 (70%), Gaps = 3/119 (2%)
 Frame = +1

Query: 4   NTLSENFDD--VPCQIQE-PPPSDHKKNAIPLLQKIDALTGKVQILKKEHTILSDEVKGI 174
           N  S+N D+  +P  I E  P  DH    +P+L+KI  L+ K+Q LKK+H  LS++VK  
Sbjct: 49  NETSDNMDESSIPNGIHECSPREDH---TLPILKKILDLSTKIQNLKKQHVALSNQVK-- 103

Query: 175 TVTDESFLGSGVLSALRHLGSEYDTLKKKYQMEYSERKRLYNEVIELKGNIRVFCRCRP 351
            +T ESF G  VL +++ LG+EY+ LK+KY  E SER+RLYNEVIELKGNIRVFCRCRP
Sbjct: 104 -LTTESFPGLDVLKSVQLLGAEYEVLKRKYVEESSERRRLYNEVIELKGNIRVFCRCRP 161


>ref|XP_003520811.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 735

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/118 (52%), Positives = 84/118 (71%), Gaps = 2/118 (1%)
 Frame = +1

Query: 4   NTLSENFDD--VPCQIQEPPPSDHKKNAIPLLQKIDALTGKVQILKKEHTILSDEVKGIT 177
           N  S+N D+  +   I+E  P + +   +P+L+KI  L+ K+Q LKK+H  LSD+VK   
Sbjct: 24  NETSDNMDESSISNGIRECSPDEDR--TLPILKKILDLSTKIQNLKKQHVALSDQVK--- 78

Query: 178 VTDESFLGSGVLSALRHLGSEYDTLKKKYQMEYSERKRLYNEVIELKGNIRVFCRCRP 351
           +T ESF G  VL +++ LG+EY+ LK+KY  E SER+RLYN+VIELKGNIRVFCRCRP
Sbjct: 79  LTAESFTGLDVLKSVQLLGTEYEVLKRKYLEESSERRRLYNKVIELKGNIRVFCRCRP 136


>ref|XP_002512378.1| Kinesin-3, putative [Ricinus communis] gi|223548339|gb|EEF49830.1|
           Kinesin-3, putative [Ricinus communis]
          Length = 786

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/97 (62%), Positives = 75/97 (77%)
 Frame = +1

Query: 61  SDHKKNAIPLLQKIDALTGKVQILKKEHTILSDEVKGITVTDESFLGSGVLSALRHLGSE 240
           S  ++  +P+LQKI  L+ ++Q LKKEH+ILS++VK  TV  +SF GS VL  LR L +E
Sbjct: 52  SSAQEPTLPILQKIINLSYQIQNLKKEHSILSNQVK--TVNADSFPGSQVLDTLRLLCNE 109

Query: 241 YDTLKKKYQMEYSERKRLYNEVIELKGNIRVFCRCRP 351
           ++ LKKKY  E SERKRLYNEVIELKGNIRVFCRCRP
Sbjct: 110 HELLKKKYLEESSERKRLYNEVIELKGNIRVFCRCRP 146


>ref|XP_003555602.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 795

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/116 (51%), Positives = 79/116 (68%)
 Frame = +1

Query: 4   NTLSENFDDVPCQIQEPPPSDHKKNAIPLLQKIDALTGKVQILKKEHTILSDEVKGITVT 183
           N  S++ D+          S  K + +P+L+KI  L  K+Q LKK+H  L DEVK   +T
Sbjct: 56  NENSDSMDEHSLSNGTHEVSPDKGHTLPILKKILDLGAKIQDLKKQHITLCDEVK---LT 112

Query: 184 DESFLGSGVLSALRHLGSEYDTLKKKYQMEYSERKRLYNEVIELKGNIRVFCRCRP 351
            ESF G+ +L +++ LG+EY+ LK+KY  E SER+RLYNEVIELKGNIRVFCRCRP
Sbjct: 113 SESFPGNDILKSVQLLGAEYELLKRKYSEESSERRRLYNEVIELKGNIRVFCRCRP 168


>ref|XP_002328454.1| predicted protein [Populus trichocarpa] gi|222838169|gb|EEE76534.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/115 (53%), Positives = 80/115 (69%)
 Frame = +1

Query: 7   TLSENFDDVPCQIQEPPPSDHKKNAIPLLQKIDALTGKVQILKKEHTILSDEVKGITVTD 186
           T++   + V  +I++  PS  +   +P+LQKI  L+ K+Q LKKEH+ LS++VK      
Sbjct: 28  TINSEEESVSNRIRQVSPS--QGTTLPILQKIINLSDKIQNLKKEHSNLSNQVK---TAK 82

Query: 187 ESFLGSGVLSALRHLGSEYDTLKKKYQMEYSERKRLYNEVIELKGNIRVFCRCRP 351
           +SFLG   L  L+ L +EY+ LKKKY  E SERKRLYNEVIELKGNI+VFCRCRP
Sbjct: 83  DSFLGPNNLDTLQKLVNEYELLKKKYLQELSERKRLYNEVIELKGNIKVFCRCRP 137


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