BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040155
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containi...    74   9e-12
ref|XP_002518643.1| pentatricopeptide repeat-containing protein,...    72   6e-11
ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selag...    58   9e-07
ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 634

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/77 (51%), Positives = 53/77 (68%)
 Frame = +3

Query: 3   LQGDHNNNINNFHRDFIDIVLVYLYGKRGNIHRSRESFDRITERGQCRSVIHWNTMIGGY 182
           L GD  +     H D ++ VLVYL+GK G I +SRE+FDRI+  G+  SV+ WN MI  Y
Sbjct: 261 LVGDGVSTRETCH-DSVNTVLVYLFGKWGRIEKSRENFDRISTSGKS-SVVPWNAMINAY 318

Query: 183 VQNGCPREALSLFKLML 233
           VQNGCP E L+LF++M+
Sbjct: 319 VQNGCPVEGLNLFRMMV 335


>ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = +3

Query: 15  HNNNINNFHRDFIDIVLVYLYGKRGNIHRSRESFDRITERGQCRSVIHWNTMIGGYVQNG 194
           ++++  +F RD ++ VL YLYGK G + + +E FD I   G+ RSV+ WN +I  YVQNG
Sbjct: 72  NDDDTGSFGRDSVNTVLAYLYGKWGKVEKCKERFDEIVGIGK-RSVLPWNVIISAYVQNG 130

Query: 195 CPREALSLFKLML 233
           C  EALSLF++M+
Sbjct: 131 CSFEALSLFRVMI 143


>ref|XP_002518643.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542024|gb|EEF43568.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 318

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = +3

Query: 18  NNNINNFHRDFIDIVLVYLYGKRGNIHRSRESFDRITERGQCRSVIHWNTMIGGYVQNGC 197
           + N+ +   D ++ VLVYLYGK G I +SRE FD I++ G+ RSV+ WN+MI  YVQNG 
Sbjct: 73  DGNLKSSTCDKVNNVLVYLYGKLGKIEKSRERFDDISDSGK-RSVLPWNSMINAYVQNGY 131

Query: 198 PREALSLFKLML 233
             EAL +F LM+
Sbjct: 132 ALEALCIFHLMV 143


>ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
           gi|300168649|gb|EFJ35252.1| hypothetical protein
           SELMODRAFT_80412 [Selaginella moellendorffii]
          Length = 860

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +3

Query: 30  NNFHRDFI-DIVLVYLYGKRGNIHRSRESFDRITERGQCRSVIHWNTMIGGYVQNGCPRE 206
           ++F+ D +   VL+ +Y K G + ++R  FD++TE+ +    + W TMIGGY QNG P E
Sbjct: 564 SDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNE----VSWTTMIGGYAQNGRPAE 619

Query: 207 ALSLFKLM 230
           AL L+K M
Sbjct: 620 ALELYKAM 627


>ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|222870841|gb|EEF07972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = +3

Query: 48  FIDIVLVYLYGKRGNIHRSRESFDRITERGQCRSVIHWNTMIGGYVQNGCPREALSLFKL 227
           ++   LV LYGK G++  +R+ FD+I ER    S++ WN+MI GY QNG  +EA+ LF  
Sbjct: 147 YVQAALVALYGKCGDLINARKVFDKIRER----SIVAWNSMISGYEQNGFAKEAIGLFDR 202

Query: 228 M 230
           M
Sbjct: 203 M 203