BLASTX nr result

ID: Cimicifuga21_contig00040127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040127
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569240.1| PREDICTED: ATP-dependent zinc metalloproteas...    81   1e-13
ref|XP_002516427.1| Protein YME1, putative [Ricinus communis] gi...    80   1e-13
ref|XP_004141320.1| PREDICTED: ATP-dependent zinc metalloproteas...    80   2e-13
gb|AFW81335.1| hypothetical protein ZEAMMB73_564953 [Zea mays]         80   2e-13
ref|XP_002279005.2| PREDICTED: ATP-dependent zinc metalloproteas...    80   2e-13

>ref|XP_003569240.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 5,
           mitochondrial-like [Brachypodium distachyon]
          Length = 704

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/74 (60%), Positives = 48/74 (64%)
 Frame = +1

Query: 19  GLLNKDKVQSSMEFSTKFDDVKGIDEAKAELEEIVHYLRDPKRFTCXXXXXXXXXXXXXX 198
           GL   ++VQ SME STKF DVKG+DEAKAELEEIVHYLRDPKRFT               
Sbjct: 205 GLGLNEEVQPSMESSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGP 264

Query: 199 XXXXXTMLARAIAG 240
                TMLARAIAG
Sbjct: 265 PGTGKTMLARAIAG 278


>ref|XP_002516427.1| Protein YME1, putative [Ricinus communis]
           gi|223544247|gb|EEF45768.1| Protein YME1, putative
           [Ricinus communis]
          Length = 716

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/74 (60%), Positives = 48/74 (64%)
 Frame = +1

Query: 19  GLLNKDKVQSSMEFSTKFDDVKGIDEAKAELEEIVHYLRDPKRFTCXXXXXXXXXXXXXX 198
           GL   ++VQ SME STKF DVKG+DEAKAELEEIVHYLRDPKRFT               
Sbjct: 206 GLGLHEEVQPSMESSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGP 265

Query: 199 XXXXXTMLARAIAG 240
                TMLARAIAG
Sbjct: 266 PGTGKTMLARAIAG 279


>ref|XP_004141320.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 4,
           mitochondrial-like [Cucumis sativus]
           gi|449521631|ref|XP_004167833.1| PREDICTED:
           ATP-dependent zinc metalloprotease FTSH 4,
           mitochondrial-like [Cucumis sativus]
          Length = 716

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/74 (59%), Positives = 49/74 (66%)
 Frame = +1

Query: 19  GLLNKDKVQSSMEFSTKFDDVKGIDEAKAELEEIVHYLRDPKRFTCXXXXXXXXXXXXXX 198
           GL   ++VQ SME +TKF+DVKG+DEAKAELEEIVHYLRDPKRFT               
Sbjct: 208 GLGLNEEVQPSMESNTKFNDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGP 267

Query: 199 XXXXXTMLARAIAG 240
                TMLARAIAG
Sbjct: 268 PGTGKTMLARAIAG 281


>gb|AFW81335.1| hypothetical protein ZEAMMB73_564953 [Zea mays]
          Length = 786

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/74 (56%), Positives = 48/74 (64%)
 Frame = +1

Query: 19  GLLNKDKVQSSMEFSTKFDDVKGIDEAKAELEEIVHYLRDPKRFTCXXXXXXXXXXXXXX 198
           GL   ++V+ +M+  TKF DVKG+DEAKAELEEIVHYLRDPKRFTC              
Sbjct: 205 GLGLNEEVRPNMDSKTKFSDVKGVDEAKAELEEIVHYLRDPKRFTCLGGKLPKGVLLVGP 264

Query: 199 XXXXXTMLARAIAG 240
                TMLARAIAG
Sbjct: 265 PGTGKTMLARAIAG 278


>ref|XP_002279005.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 4,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/74 (59%), Positives = 49/74 (66%)
 Frame = +1

Query: 19  GLLNKDKVQSSMEFSTKFDDVKGIDEAKAELEEIVHYLRDPKRFTCXXXXXXXXXXXXXX 198
           GL   ++VQ SME +TKF+DVKG+DEAKAELEEIVHYLRDPKRFT               
Sbjct: 203 GLGLNEEVQPSMESNTKFNDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGP 262

Query: 199 XXXXXTMLARAIAG 240
                TMLARAIAG
Sbjct: 263 PGTGKTMLARAIAG 276


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