BLASTX nr result

ID: Cimicifuga21_contig00040078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040078
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266318.1| PREDICTED: uncharacterized protein LOC100265...   146   2e-33
ref|XP_002322416.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002318277.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002510916.1| conserved hypothetical protein [Ricinus comm...   135   3e-30
gb|AFK49289.1| unknown [Lotus japonicus]                              114   8e-24

>ref|XP_002266318.1| PREDICTED: uncharacterized protein LOC100265251 [Vitis vinifera]
           gi|296084137|emb|CBI24525.3| unnamed protein product
           [Vitis vinifera]
          Length = 219

 Score =  146 bits (369), Expect = 2e-33
 Identities = 80/140 (57%), Positives = 95/140 (67%), Gaps = 4/140 (2%)
 Frame = -1

Query: 486 LHSSQDALGPDANNVEFVIGDARSLLMNYYKGTDFVLIDCNLETHEGVFQVVNT-GSING 310
           LHSS+  LG DA ++EFV+G+A++LL+N Y   DFVLIDCNLE HEG+ + V   G  NG
Sbjct: 80  LHSSKMLLGLDACHIEFVVGEAQTLLLNDYMEADFVLIDCNLENHEGILRAVQAGGKPNG 139

Query: 309 AVVVGYNAXXXXXXXXXXXKTQLLPIGEGLLVARIPAADKVEVV---AAKRSRWIVKIDQ 139
           AVV+GYNA           KTQLLPIGEGLLV RI A  KV        KRS W+VK+D+
Sbjct: 140 AVVIGYNAFGKGTWRVNGSKTQLLPIGEGLLVTRIGAKAKVNGSCGGVGKRSHWVVKVDK 199

Query: 138 CTGEEHVFMIRSRQRKEIEA 79
           CTGEEHVF +R  Q K IEA
Sbjct: 200 CTGEEHVFRVRFPQGKRIEA 219


>ref|XP_002322416.1| predicted protein [Populus trichocarpa] gi|222869412|gb|EEF06543.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  140 bits (352), Expect = 1e-31
 Identities = 77/139 (55%), Positives = 92/139 (66%), Gaps = 3/139 (2%)
 Frame = -1

Query: 486 LHSSQDALGPDANNVEFVIGDARSLLMNYYKGTDFVLIDCNLETHEGVFQVVNTG-SING 310
           L  S+  LG DA +VEFVIG+ARSLL+++Y   DFVLIDCNLE H+G+   V  G   NG
Sbjct: 80  LQLSKKILGCDACHVEFVIGEARSLLLSHYSEADFVLIDCNLENHDGILGAVRAGRKRNG 139

Query: 309 AVVVGYNAXXXXXXXXXXXKTQLLPIGEGLLVARIPAADKVE--VVAAKRSRWIVKIDQC 136
           AV+VGYNA           KTQLLPIG GLLV RI    K+       KRS W+VK+D+C
Sbjct: 140 AVIVGYNAFSKRSWRSGGSKTQLLPIGGGLLVTRIATDAKIADGCGCGKRSHWVVKVDKC 199

Query: 135 TGEEHVFMIRSRQRKEIEA 79
           TGEEHVF +R  Q K+IEA
Sbjct: 200 TGEEHVFRVRFPQGKQIEA 218


>ref|XP_002318277.1| predicted protein [Populus trichocarpa] gi|222858950|gb|EEE96497.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  135 bits (341), Expect = 3e-30
 Identities = 77/139 (55%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
 Frame = -1

Query: 486 LHSSQDALGPDANNVEFVIGDARSLLMNYYKGTDFVLIDCNLETHEGVFQVVNT-GSING 310
           L  S+  LG DA +VEFVIG+A+SLL+ +Y   DFVLIDCNLE HE +   V      NG
Sbjct: 80  LQLSKKILGYDACHVEFVIGEAQSLLLTHYSEADFVLIDCNLENHEAILGSVQARKKRNG 139

Query: 309 AVVVGYNAXXXXXXXXXXXKTQLLPIGEGLLVARIPAADKVE--VVAAKRSRWIVKIDQC 136
           AVVVGYNA           KTQLLPIG GLLV RI A+ K+       KRS W+VK+D+C
Sbjct: 140 AVVVGYNAFSKGSWRSGGSKTQLLPIGGGLLVTRISASAKIADGCGHGKRSHWVVKVDEC 199

Query: 135 TGEEHVFMIRSRQRKEIEA 79
           TGEEHVF +R  Q K+IEA
Sbjct: 200 TGEEHVFRVRFPQGKQIEA 218


>ref|XP_002510916.1| conserved hypothetical protein [Ricinus communis]
           gi|223550031|gb|EEF51518.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score =  135 bits (340), Expect = 3e-30
 Identities = 76/145 (52%), Positives = 96/145 (66%), Gaps = 9/145 (6%)
 Frame = -1

Query: 486 LHSSQDALGPDANNVEFVIGDARSLLMNYYKGTDFVLIDCNLETHEGVFQVVNTGS---I 316
           L S +  LG DA +V+FVIG+A++LL+ +Y   DFVL+DCNLE HEG+   V   S    
Sbjct: 62  LESLRQCLGIDACHVQFVIGEAQNLLLTHYSEADFVLVDCNLENHEGILAAVEGSSRRKR 121

Query: 315 NGAVVVGYNAXXXXXXXXXXXKTQLLPIGEGLLVARIPAADKVEVVAA-----KRSRWIV 151
           NGAVVVGYNA           KTQLLPIGEGLLV RI A+ ++   ++     K S W+V
Sbjct: 122 NGAVVVGYNAFTKGSWWSSRAKTQLLPIGEGLLVTRIAASGRIHRSSSCGHGKKSSHWVV 181

Query: 150 KIDQCTGEEHVFMIRS-RQRKEIEA 79
           K+D+CTGEEHVF +RS  Q K+IEA
Sbjct: 182 KVDKCTGEEHVFRVRSFPQGKQIEA 206


>gb|AFK49289.1| unknown [Lotus japonicus]
          Length = 226

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/147 (44%), Positives = 92/147 (62%), Gaps = 11/147 (7%)
 Frame = -1

Query: 486 LHSSQDALGPDANNVEFVIGDARSLLMN-YYKGTDFVLIDCNLETHEGVFQVVNTGSI-- 316
           L++S+ ALG  +++V+F++G+A+ LL++  +   DF++IDCNLE HE + + V  GS   
Sbjct: 80  LNASKIALGVASHHVQFMVGEAQKLLLSDKFVAADFLVIDCNLENHEEILKAVQEGSREK 139

Query: 315 NGAVVVGYNAXXXXXXXXXXXK----TQLLPIGEGLLVARIPAADKVEVVAAK----RSR 160
           NG VVVGYNA                TQLLPIGEGLLV R   +D      +K    +SR
Sbjct: 140 NGTVVVGYNAFSCRGSWLSSCGSKTKTQLLPIGEGLLVTRFGVSDNSPKHGSKMGKMKSR 199

Query: 159 WIVKIDQCTGEEHVFMIRSRQRKEIEA 79
           W+VK+D+CTGEEHVF +R    K I+A
Sbjct: 200 WVVKVDKCTGEEHVFRVRFPHGKVIQA 226


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