BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040067
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat...   119   2e-25
ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [S...   119   3e-25
ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...   117   7e-25
emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]   117   7e-25
ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group] g...   117   1e-24

>ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/104 (54%), Positives = 75/104 (72%)
 Frame = +3

Query: 3   YIIRSRLDDEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAK 182
           Y+IR   D  ++F+S++LIDM+ KCG +  A R+F R+   D+VSW  MI G A++G A+
Sbjct: 299 YVIRGGFDG-NVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAR 357

Query: 183 AALALFDRMEAEGAIPNSITFIEVLNACSHAGLVNEGWKHFNSM 314
            AL LFDRME     PN ITF+ VL ACSHAGLV++GWK+FNSM
Sbjct: 358 EALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSM 401



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = +3

Query: 30  EDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAKAALALFDRM 209
           +D+FV ++LIDM+  C   +Y+ ++F  L  RD + WN+M+ G A  G+   AL LF RM
Sbjct: 206 DDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRM 265

Query: 210 EAEGAIPNSITFIEVLNACSH 272
              G  P  +TF  ++ AC +
Sbjct: 266 LHSGIKPMPVTFSSLIPACGN 286


>ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
           gi|241939366|gb|EES12511.1| hypothetical protein
           SORBIDRAFT_06g022570 [Sorghum bicolor]
          Length = 549

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/104 (53%), Positives = 76/104 (73%)
 Frame = +3

Query: 3   YIIRSRLDDEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAK 182
           Y+IR   +D ++F+S++LIDM+ KCG +  A  +F R+   DVVSW  MI G+A++G A+
Sbjct: 297 YVIRGGFED-NVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAR 355

Query: 183 AALALFDRMEAEGAIPNSITFIEVLNACSHAGLVNEGWKHFNSM 314
            AL LF+RME   A PN ITF+ VL ACSHAGLV++GWK+F SM
Sbjct: 356 EALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSM 399



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/89 (33%), Positives = 50/89 (56%)
 Frame = +3

Query: 27  DEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAKAALALFDR 206
           D D+FV ++LIDM+  C   +Y+ ++F  L  RD + WN+++ G A  G+ + AL +F R
Sbjct: 203 DNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVEEALGIFRR 262

Query: 207 MEAEGAIPNSITFIEVLNACSHAGLVNEG 293
           M   G  P  +TF  ++  C +   +  G
Sbjct: 263 MLQTGVRPVPVTFSSLIPVCGNLASLRFG 291


>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/104 (52%), Positives = 77/104 (74%)
 Frame = +3

Query: 3   YIIRSRLDDEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAK 182
           YIIRSR D  ++F+++AL+DM+ KCG +  A  +F ++   D+VSW  MI G+A++G+A 
Sbjct: 362 YIIRSRFDG-NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 420

Query: 183 AALALFDRMEAEGAIPNSITFIEVLNACSHAGLVNEGWKHFNSM 314
            A++LF RME EG  PN + F+ VL ACSHAGLV+E WK+FNSM
Sbjct: 421 DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM 464



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/97 (34%), Positives = 54/97 (55%)
 Frame = +3

Query: 3   YIIRSRLDDEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAK 182
           Y IR+  D  D+F+ ++LIDM+ KC  ++ + R+F  L Q D +SWN++I G    G   
Sbjct: 261 YAIRNGYD-ADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFD 319

Query: 183 AALALFDRMEAEGAIPNSITFIEVLNACSHAGLVNEG 293
             L  F +M      PN ++F  ++ AC+H   ++ G
Sbjct: 320 EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLG 356


>emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/104 (52%), Positives = 77/104 (74%)
 Frame = +3

Query: 3   YIIRSRLDDEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAK 182
           YIIRSR D  ++F+++AL+DM+ KCG +  A  +F ++   D+VSW  MI G+A++G+A 
Sbjct: 322 YIIRSRFDG-NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 380

Query: 183 AALALFDRMEAEGAIPNSITFIEVLNACSHAGLVNEGWKHFNSM 314
            A++LF RME EG  PN + F+ VL ACSHAGLV+E WK+FNSM
Sbjct: 381 DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM 424



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/97 (34%), Positives = 54/97 (55%)
 Frame = +3

Query: 3   YIIRSRLDDEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAK 182
           Y IR+  D  D+F+ ++LIDM+ KC  ++ + R+F  L Q D +SWN++I G    G   
Sbjct: 221 YAIRNGYD-ADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFD 279

Query: 183 AALALFDRMEAEGAIPNSITFIEVLNACSHAGLVNEG 293
             L  F +M      PN ++F  ++ AC+H   ++ G
Sbjct: 280 EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLG 316


>ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
           gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa
           Japonica Group]
          Length = 967

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/104 (51%), Positives = 75/104 (72%)
 Frame = +3

Query: 3   YIIRSRLDDEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAK 182
           Y+IR+R +D ++F+S++LIDM+ KCG ++ A R+F  +   D+VSW  MI G+A++G   
Sbjct: 613 YLIRARFND-NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 671

Query: 183 AALALFDRMEAEGAIPNSITFIEVLNACSHAGLVNEGWKHFNSM 314
            A  LF+RME     PN ITF+ VL ACSHAGLV+ GWK+FNSM
Sbjct: 672 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSM 715



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/89 (37%), Positives = 52/89 (58%)
 Frame = +3

Query: 27  DEDLFVSNALIDMFVKCGFMEYADRLFMRLSQRDVVSWNTMIQGFAIYGNAKAALALFDR 206
           D D+FV ++LIDM+  C  M+Y+ ++F   S  D V WN+M+ G+A  G+ + AL +F R
Sbjct: 519 DNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRR 578

Query: 207 MEAEGAIPNSITFIEVLNACSHAGLVNEG 293
           M   G  P  +TF  ++ A  +  L+  G
Sbjct: 579 MLQAGVRPVPVTFSSLIPAFGNLSLLRLG 607