BLASTX nr result

ID: Cimicifuga21_contig00040062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040062
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichoca...    75   7e-12
gb|ACP30629.1| disease resistance protein [Brassica rapa subsp. ...    70   1e-10
gb|ACP30594.1| disease resistance protein [Brassica rapa subsp. ...    70   1e-10
gb|AAA63149.1| myosin heavy chain homolog, partial [Arabidopsis ...    69   5e-10
ref|NP_190664.1| disease resistance RPP13-like protein 4 [Arabid...    69   5e-10

>ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|105923264|gb|ABF81467.1| NBS-LRR type disease
           resistance protein [Populus trichocarpa]
           gi|222867522|gb|EEF04653.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 855

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/76 (42%), Positives = 51/76 (67%)
 Frame = -3

Query: 240 IHNVRRLDEHEAWSLFCDIAFSVNETMSFDSEIQTLGKDILKKCEGYPLSIKTIAGLLST 61
           IH+ + LD+ ++WSLFC+ AF   +      + + +GK+I+ KC G PL+IKTIA  L+T
Sbjct: 310 IHHPKVLDDKDSWSLFCNFAFQETKGKCHKPQFEIVGKEIVGKCGGLPLAIKTIAASLAT 369

Query: 60  RMQSLHQWKEVREKFH 13
            + +L +WK++ E FH
Sbjct: 370 EVHNLGKWKDILEHFH 385


>gb|ACP30629.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 858

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = -3

Query: 237 HNVRRLDEHEAWSLFCDIAFSVNETMSFDSEIQTLGKDILKKCEGYPLSIKTIAGLLSTR 58
           H    L    +W LFC +AF+ N  +   SE++ +GK+I+ KC+G PL+IK + GLL  +
Sbjct: 318 HRPELLSADNSWLLFCKVAFAANNGVCERSELEDVGKEIVTKCKGLPLTIKAVGGLLLCK 377

Query: 57  MQSLHQWKEVREKFHIEL 4
               H+WK + E F  EL
Sbjct: 378 DHVYHEWKRISEYFQDEL 395


>gb|ACP30594.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 589

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = -3

Query: 237 HNVRRLDEHEAWSLFCDIAFSVNETMSFDSEIQTLGKDILKKCEGYPLSIKTIAGLLSTR 58
           H    L    +W LFC +AF+ N  +   SE++ +GK+I+ KC+G PL+IK + GLL  +
Sbjct: 129 HRPELLSADNSWLLFCKVAFAANNGVCERSELEDVGKEIVTKCKGLPLTIKAVGGLLLCK 188

Query: 57  MQSLHQWKEVREKFHIEL 4
               H+WK + E F  EL
Sbjct: 189 DHVYHEWKRISEYFQDEL 206


>gb|AAA63149.1| myosin heavy chain homolog, partial [Arabidopsis thaliana]
          Length = 904

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/78 (37%), Positives = 46/78 (58%)
 Frame = -3

Query: 237 HNVRRLDEHEAWSLFCDIAFSVNETMSFDSEIQTLGKDILKKCEGYPLSIKTIAGLLSTR 58
           H    L    +W LFC++AF+ N+      E++ +GK+I+ KC+G PL+IK + GLL  +
Sbjct: 365 HRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCK 424

Query: 57  MQSLHQWKEVREKFHIEL 4
               H+W+ + E F  EL
Sbjct: 425 DHVYHEWRRIAEHFQDEL 442


>ref|NP_190664.1| disease resistance RPP13-like protein 4 [Arabidopsis thaliana]
           gi|30693383|ref|NP_850677.1| disease resistance
           RPP13-like protein 4 [Arabidopsis thaliana]
           gi|29839509|sp|Q38834.2|R13L4_ARATH RecName:
           Full=Disease resistance RPP13-like protein 4
           gi|4835246|emb|CAB42924.1| putative disease resistance
           protein [Arabidopsis thaliana]
           gi|110742313|dbj|BAE99081.1| putative disease resistance
           protein [Arabidopsis thaliana]
           gi|332645209|gb|AEE78730.1| disease resistance
           RPP13-like protein 4 [Arabidopsis thaliana]
           gi|332645210|gb|AEE78731.1| disease resistance
           RPP13-like protein 4 [Arabidopsis thaliana]
          Length = 852

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/78 (37%), Positives = 46/78 (58%)
 Frame = -3

Query: 237 HNVRRLDEHEAWSLFCDIAFSVNETMSFDSEIQTLGKDILKKCEGYPLSIKTIAGLLSTR 58
           H    L    +W LFC++AF+ N+      E++ +GK+I+ KC+G PL+IK + GLL  +
Sbjct: 313 HRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCK 372

Query: 57  MQSLHQWKEVREKFHIEL 4
               H+W+ + E F  EL
Sbjct: 373 DHVYHEWRRIAEHFQDEL 390


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