BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040047
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   129   2e-28
ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   123   2e-26
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   121   5e-26
ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat...   108   3e-22

>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/92 (64%), Positives = 76/92 (82%)
 Frame = -3

Query: 276 ALRLLKQMEASGYSANVFTYTILIDGFCNAKRPDEAFKLLETMREKNVGPNDATFRSLVH 97
           ALRL+KQME  GYS NVFTYTILIDGF NAK+ DEAF++LETM+ + V P++AT RS +H
Sbjct: 271 ALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIH 330

Query: 96  GVFKCSAPHKAYELFLRFLAREPLMPKPACDT 1
           GVF+C AP+KA+EL + F+ REP++ + ACDT
Sbjct: 331 GVFRCVAPNKAFELAIEFIEREPVLQRLACDT 362


>ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|222851220|gb|EEE88767.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/92 (65%), Positives = 76/92 (82%)
 Frame = -3

Query: 276 ALRLLKQMEASGYSANVFTYTILIDGFCNAKRPDEAFKLLETMREKNVGPNDATFRSLVH 97
           ALRL+KQME  GYSANV+TYT LI GFCNAKR DEAF++ ETM+ +NV PN+AT RSLVH
Sbjct: 108 ALRLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLVH 167

Query: 96  GVFKCSAPHKAYELFLRFLAREPLMPKPACDT 1
           GVF+C AP +A+EL + F+ +EP++ + ACDT
Sbjct: 168 GVFRCVAPREAFELVIDFIEKEPVLGRLACDT 199


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/91 (65%), Positives = 72/91 (79%)
 Frame = -3

Query: 276 ALRLLKQMEASGYSANVFTYTILIDGFCNAKRPDEAFKLLETMREKNVGPNDATFRSLVH 97
           ALRL+KQME  GY  NVFTYTILIDGF NAKR  EAFK+L+TM+E+NV PN+AT RSLVH
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVH 342

Query: 96  GVFKCSAPHKAYELFLRFLAREPLMPKPACD 4
           GVF+C AP KA+EL L F+ R+  + +  CD
Sbjct: 343 GVFRCIAPDKAFELLLEFVERKQGITQLVCD 373


>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/91 (64%), Positives = 71/91 (78%)
 Frame = -3

Query: 276 ALRLLKQMEASGYSANVFTYTILIDGFCNAKRPDEAFKLLETMREKNVGPNDATFRSLVH 97
           ALRL+KQME  GY  NVFTYTILIDGF NAKR  E FK+L+TM+E+NV PN+AT RSLVH
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVH 342

Query: 96  GVFKCSAPHKAYELFLRFLAREPLMPKPACD 4
           GVF+C AP KA+EL L F+ R+  + +  CD
Sbjct: 343 GVFRCIAPDKAFELLLEFVERKQGITQLVCD 373


>ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Brachypodium distachyon]
          Length = 684

 Score =  108 bits (271), Expect = 3e-22
 Identities = 47/83 (56%), Positives = 64/83 (77%)
 Frame = -3

Query: 276 ALRLLKQMEASGYSANVFTYTILIDGFCNAKRPDEAFKLLETMREKNVGPNDATFRSLVH 97
           ALRL++QME +G   NVFTYT+L+DGFCNA RP++A  + +TM+EK V PN+A++R+LVH
Sbjct: 230 ALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVH 289

Query: 96  GVFKCSAPHKAYELFLRFLAREP 28
           G F+C   HKAY +   +L REP
Sbjct: 290 GAFRCLGRHKAYVMLTEWLGREP 312