BLASTX nr result

ID: Cimicifuga21_contig00040045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040045
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN87331.1| zinc finger protein-like protein [Vitis vinifera]      126   2e-27
ref|XP_002264568.1| PREDICTED: uncharacterized protein LOC100241...   126   2e-27
gb|AEP17822.1| B-box 52 protein [Expression vector pMON108080]        100   2e-19
ref|XP_003530172.1| PREDICTED: uncharacterized protein LOC100781...    97   1e-18
ref|XP_002311907.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>gb|ADN87331.1| zinc finger protein-like protein [Vitis vinifera]
          Length = 260

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/88 (64%), Positives = 67/88 (76%)
 Frame = -1

Query: 265 MKGRMCELCNGEASLYCVSDSAFLCWNCDARVHEANFLVARHARRTICCKCKGFDGNLIS 86
           MKGR+CELCN EASLYC SDSAFLCW+CDARVH ANFLVARH R T+C +C G  G+   
Sbjct: 1   MKGRVCELCNEEASLYCGSDSAFLCWSCDARVHGANFLVARHVRHTLCSECNGLAGDTFF 60

Query: 85  GVGFRRGQTTCRSCSSESDVDNTYDSDS 2
           GVGF+  +  CRSCSSE + + + D DS
Sbjct: 61  GVGFQPHRLICRSCSSEVESETSTDHDS 88


>ref|XP_002264568.1| PREDICTED: uncharacterized protein LOC100241102 [Vitis vinifera]
          Length = 260

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/88 (64%), Positives = 67/88 (76%)
 Frame = -1

Query: 265 MKGRMCELCNGEASLYCVSDSAFLCWNCDARVHEANFLVARHARRTICCKCKGFDGNLIS 86
           MKGR+CELCN EASLYC SDSAFLCW+CDARVH ANFLVARH R T+C +C G  G+   
Sbjct: 1   MKGRVCELCNEEASLYCGSDSAFLCWSCDARVHGANFLVARHVRHTLCSECNGLAGDTFF 60

Query: 85  GVGFRRGQTTCRSCSSESDVDNTYDSDS 2
           GVGF+  +  CRSCSSE + + + D DS
Sbjct: 61  GVGFQPHRLICRSCSSEVESETSTDHDS 88


>gb|AEP17822.1| B-box 52 protein [Expression vector pMON108080]
          Length = 241

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = -1

Query: 265 MKGRMCELCNGEASLYCVSDSAFLCWNCDARVHEANFLVARHARRTICCKCKGFDG-NLI 89
           MKG+ CELC+ +ASLYC SDSAFLC +CDA VH ANFLVARH RR +C KC  F G ++ 
Sbjct: 1   MKGKTCELCDQQASLYCPSDSAFLCSDCDAAVHAANFLVARHLRRLLCSKCNRFAGFHIS 60

Query: 88  SGVGFRRGQTTCRSCSSESDVDNTYDS 8
           SG   R   +TC SCS E+   +  DS
Sbjct: 61  SGAISRHLSSTCSSCSPENPSADYSDS 87


>ref|XP_003530172.1| PREDICTED: uncharacterized protein LOC100781783 [Glycine max]
           gi|347666428|gb|AEP17825.1| B-box 53 protein [Expression
           vector pMON98939]
          Length = 243

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/88 (57%), Positives = 58/88 (65%)
 Frame = -1

Query: 265 MKGRMCELCNGEASLYCVSDSAFLCWNCDARVHEANFLVARHARRTICCKCKGFDGNLIS 86
           MK + CELC+  ASLYC SDSAFLC++CDA VH ANFLVARH RR +C KC  F    IS
Sbjct: 1   MKPKTCELCHQLASLYCPSDSAFLCFHCDAAVHAANFLVARHLRRLLCSKCNRFAAIHIS 60

Query: 85  GVGFRRGQTTCRSCSSESDVDNTYDSDS 2
           G   R   +TC SCS E     + DSDS
Sbjct: 61  GAISRHLSSTCTSCSLEIP---SADSDS 85


>ref|XP_002311907.1| predicted protein [Populus trichocarpa] gi|222851727|gb|EEE89274.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/78 (51%), Positives = 49/78 (62%)
 Frame = -1

Query: 265 MKGRMCELCNGEASLYCVSDSAFLCWNCDARVHEANFLVARHARRTICCKCKGFDGNLIS 86
           M  ++CELC  EA LYC SD+AFLC+ CD+ VH ANF+V+RH RR IC  C    G   S
Sbjct: 1   MAVKVCELCQREAGLYCDSDAAFLCFECDSNVHNANFVVSRHLRRVICSACNSLTGGSFS 60

Query: 85  GVGFRRGQTTCRSCSSES 32
           G      + TC SCS E+
Sbjct: 61  GTAPSLRRVTCLSCSPEN 78


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