BLASTX nr result

ID: Cimicifuga21_contig00040040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040040
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95781.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
ref|XP_002307827.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|XP_003571059.1| PREDICTED: mitotic spindle checkpoint compon...    55   5e-06
ref|XP_002273598.2| PREDICTED: probable inactive serine/threonin...    55   8e-06
emb|CBI40782.3| unnamed protein product [Vitis vinifera]               55   8e-06

>dbj|BAJ95781.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 410

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/42 (64%), Positives = 35/42 (83%)
 Frame = -2

Query: 281 PRVSESEKSLMLQLRRGDNRDLKKETELLKENPLRNFPPSSL 156
           P+V +S K  +L+LR+  +++LKKETELLKENPLRNFP SSL
Sbjct: 368 PQVPKSPKPSVLKLRQATSKNLKKETELLKENPLRNFPLSSL 409


>ref|XP_002307827.1| predicted protein [Populus trichocarpa] gi|222857276|gb|EEE94823.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -2

Query: 260 KSLMLQLRRGDNRDLKKETELLKENPLRNFPPSSLPR 150
           KS  L+LR+GD  D+KKET+LL+ENPLRNFP  SLPR
Sbjct: 347 KSSTLKLRQGDGLDIKKETDLLRENPLRNFPLRSLPR 383


>ref|XP_003571059.1| PREDICTED: mitotic spindle checkpoint component mad3-like
           [Brachypodium distachyon]
          Length = 394

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = -2

Query: 281 PRVSESEKSLMLQLRRGDNRDLKKETELLKENPLRNFPPSSL 156
           P+V +S K  +L+LR    R+LKKETELLKENPLRNFP SSL
Sbjct: 352 PQVPKSTKPSVLKLREAITRNLKKETELLKENPLRNFPLSSL 393


>ref|XP_002273598.2| PREDICTED: probable inactive serine/threonine-protein kinase bub1
           [Vitis vinifera]
          Length = 381

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = -2

Query: 290 AESPRVS-ESEKSLMLQLRRGDNRDLKKETELLKENPLRNFPPSSLPR 150
           AE P +  E  K    QL++GD  DLK+ET+LL+ENPLRNFP +SLPR
Sbjct: 334 AEMPEMGGEDGKPSTSQLKQGDGVDLKRETQLLRENPLRNFPLNSLPR 381


>emb|CBI40782.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = -2

Query: 290 AESPRVS-ESEKSLMLQLRRGDNRDLKKETELLKENPLRNFPPSSLPR 150
           AE P +  E  K    QL++GD  DLK+ET+LL+ENPLRNFP +SLPR
Sbjct: 334 AEMPEMGGEDGKPSTSQLKQGDGVDLKRETQLLRENPLRNFPLNSLPR 381


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