BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040023
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22121.1| polyprotein [Solanum melongena]                        164   7e-39
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     162   2e-38
gb|ABG22123.1| polyprotein [Prunus avium]                             162   3e-38
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   160   1e-37
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   159   2e-37

>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score =  164 bits (415), Expect = 7e-39
 Identities = 88/144 (61%), Positives = 113/144 (78%), Gaps = 2/144 (1%)
 Frame = +1

Query: 4   LFILLYLDDMLIASKSMVEINKLKFQVHSKFEMNDLGGAKKILGMEIQRERKKNRL-LTQ 180
           +++LLY+DDMLIA+KS  EI++LK Q+  +FEM DLG AKKILGMEI R+R++ +L LTQ
Sbjct: 81  VYLLLYVDDMLIAAKSQFEIDRLKAQLSKEFEMKDLGEAKKILGMEISRDRQRGKLCLTQ 140

Query: 181 KSYLEKAISRFGM-DSAKLVFTPLTRHFRFLAKLSPTIIEEKKNMD*VPYASAVGSLM*A 357
           K YL+K + RFG+ D +K V TPL  H +  ++LSP   EE++ M  VPYA+AVGSLM A
Sbjct: 141 KQYLKKVLQRFGINDDSKPVSTPLAPHLKLSSQLSPKTDEEREYMAKVPYANAVGSLMYA 200

Query: 358 MVCTRPDISQAVSVVSRFMANPGK 429
           MVCTR DISQAVSVVSR+M +PGK
Sbjct: 201 MVCTRSDISQAVSVVSRYMHDPGK 224


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  162 bits (411), Expect = 2e-38
 Identities = 86/144 (59%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
 Frame = +1

Query: 1    ILFILLYLDDMLIASKSMVEINKLKFQVHSKFEMNDLGGAKKILGMEIQRERKKNRL-LT 177
            ++++LLY+DDMLIA+K   EI KLK Q+ S+FEM DLG AKKILGMEI RER   +L L+
Sbjct: 979  VIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLS 1038

Query: 178  QKSYLEKAISRFGMDSAKLVFTPLTRHFRFLAKLSPTIIEEKKNMD*VPYASAVGSLM*A 357
            QK Y+EK + RF M  AK V TPL  HFR  + L P    + + M  VPY+SAVGSLM A
Sbjct: 1039 QKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPLSDYDIEYMSRVPYSSAVGSLMYA 1098

Query: 358  MVCTRPDISQAVSVVSRFMANPGK 429
            MVC RPD+S A+SVV+R+MANPGK
Sbjct: 1099 MVCCRPDLSHALSVVNRYMANPGK 1122


>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score =  162 bits (409), Expect = 3e-38
 Identities = 86/139 (61%), Positives = 106/139 (76%), Gaps = 2/139 (1%)
 Frame = +1

Query: 19  YLDDMLIASKSMVEINKLKFQVHSKFEMNDLGGAKKILGMEIQRERKKNRL-LTQKSYLE 195
           Y+DDMLI  KS VEI +LK Q+ ++FEM DLG A+KILGMEI+R+R K ++ L QK YL+
Sbjct: 1   YVDDMLIVCKSKVEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLK 60

Query: 196 KAISRFGM-DSAKLVFTPLTRHFRFLAKLSPTIIEEKKNMD*VPYASAVGSLM*AMVCTR 372
           K + RFGM +++K V TPL  HF+  A +SP   EE   M  +PYASAVGSLM AMVCTR
Sbjct: 61  KVLQRFGMNENSKPVSTPLAPHFKLSASMSPNTDEESHYMAQIPYASAVGSLMYAMVCTR 120

Query: 373 PDISQAVSVVSRFMANPGK 429
           PDISQAVS+VSR+M NPGK
Sbjct: 121 PDISQAVSIVSRYMHNPGK 139


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  160 bits (404), Expect = 1e-37
 Identities = 86/143 (60%), Positives = 106/143 (74%), Gaps = 1/143 (0%)
 Frame = +1

Query: 4    LFILLYLDDMLIASKSMVEINKLKFQVHSKFEMNDLGGAKKILGMEIQRERKKNRL-LTQ 180
            +++LLY+DDMLIA+K   EI KLK Q+ S+FEM DLG AKKILGMEI R+R   +L L+Q
Sbjct: 1215 IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQ 1274

Query: 181  KSYLEKAISRFGMDSAKLVFTPLTRHFRFLAKLSPTIIEEKKNMD*VPYASAVGSLM*AM 360
            K Y+EK + RF M  AK V TPL  HFR  + L P    + + M  VPY+SAVGSLM AM
Sbjct: 1275 KGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAM 1334

Query: 361  VCTRPDISQAVSVVSRFMANPGK 429
            VC+RPD+S A+SVVSR+MANPGK
Sbjct: 1335 VCSRPDLSHALSVVSRYMANPGK 1357


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  159 bits (403), Expect = 2e-37
 Identities = 82/143 (57%), Positives = 109/143 (76%), Gaps = 1/143 (0%)
 Frame = +1

Query: 4    LFILLYLDDMLIASKSMVEINKLKFQVHSKFEMNDLGGAKKILGMEIQRERKKNRL-LTQ 180
            +++LLY+DDMLIA+KS +EI KLK  + S+F+M DLG AKKILGMEI R+RK   L L+Q
Sbjct: 1009 IYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQ 1068

Query: 181  KSYLEKAISRFGMDSAKLVFTPLTRHFRFLAKLSPTIIEEKKNMD*VPYASAVGSLM*AM 360
             +Y++K + RF M +AK V TP+  HF+  A   P+I  E + M  VPY+SAVGSLM AM
Sbjct: 1069 HNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAM 1128

Query: 361  VCTRPDISQAVSVVSRFMANPGK 429
            VC+RPD+S A+S+VSR+M+NPGK
Sbjct: 1129 VCSRPDLSYAMSLVSRYMSNPGK 1151