BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039983
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
emb|CBI41122.3| unnamed protein product [Vitis vinifera]              172   3e-41
emb|CBI23560.3| unnamed protein product [Vitis vinifera]              172   3e-41
emb|CBI23556.3| unnamed protein product [Vitis vinifera]              172   3e-41

>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/102 (79%), Positives = 91/102 (89%)
 Frame = -2

Query: 308 DQCIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMS 129
           +QCI NALISMYSRCGNI+AA QVFNEM   NVISWTSMITGFAKHG+A RALE+FHKM 
Sbjct: 471 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 530

Query: 128 ETGIKPNEVTYIAVLSACSHVGMVAEGWEHFNSMHKVHNIVP 3
           ETG KPNE+TY+AVLSACSHVGM++EG +HFNSM+K H IVP
Sbjct: 531 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 572



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = -2

Query: 308 DQCIGNALISMYSR-CGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKM 132
           D C+G  LI M+ +  G++ +A +VF++M   N+++WT MIT FA+ G AR A+++F  M
Sbjct: 163 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 222

Query: 131 SETGIKPNEVTYIAVLSACSHVGMVAEG 48
             +G  P+  TY +VLSAC+ +G++A G
Sbjct: 223 ELSGYVPDRFTYSSVLSACTELGLLALG 250



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
 Frame = -2

Query: 308 DQCIGNALISMYSRC---GNIDAASQVFNEMAITNVISWTSMITGFAKHGYA-RRALEIF 141
           D C+G +L+ MY++C   G++D + +VF +M   NV+SWT++IT + + G   + A+E+F
Sbjct: 265 DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELF 324

Query: 140 HKMSETGIKPNEVTYIAVLSACSHV 66
            KM    I+PN  ++ +VL AC ++
Sbjct: 325 CKMISGHIRPNHFSFSSVLKACGNL 349



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/85 (31%), Positives = 58/85 (68%)
 Frame = -2

Query: 302 CIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMSET 123
           C+GN+LISMY+R G ++ A + F+ +   N++S+ +++ G+AK+  +  A  +F+++++T
Sbjct: 372 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 431

Query: 122 GIKPNEVTYIAVLSACSHVGMVAEG 48
           GI  +  T+ ++LS  + +G + +G
Sbjct: 432 GIGISAFTFASLLSGAASIGAMGKG 456



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -2

Query: 308 DQCIGNALISMYSRCGNIDAASQVFNEMAIT-NVISWTSMITGFAKHGYARRALEIFHKM 132
           D  + N LIS+YS+CG+ + A  +F  M    +++SW++M++ FA +    +A+  F  M
Sbjct: 60  DSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM 119

Query: 131 SETGIKPNEVTYIAVLSACSH 69
            E G  PNE  + AV+ ACS+
Sbjct: 120 LELGFYPNEYCFAAVIRACSN 140


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/102 (79%), Positives = 91/102 (89%)
 Frame = -2

Query: 308 DQCIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMS 129
           +QCI NALISMYSRCGNI+AA QVFNEM   NVISWTSMITGFAKHG+A RALE+FHKM 
Sbjct: 291 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 350

Query: 128 ETGIKPNEVTYIAVLSACSHVGMVAEGWEHFNSMHKVHNIVP 3
           ETG KPNE+TY+AVLSACSHVGM++EG +HFNSM+K H IVP
Sbjct: 351 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 392



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/85 (38%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
 Frame = -2

Query: 308 DQCIGNALISMYSRC---GNIDAASQVFNEMAITNVISWTSMITGFAKHGYA-RRALEIF 141
           D C+G +L+ MY++C   G++D + +VF +M   NV+SWT++IT +A+ G   + A+E+F
Sbjct: 85  DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELF 144

Query: 140 HKMSETGIKPNEVTYIAVLSACSHV 66
            KM    I+PN  ++ +VL AC ++
Sbjct: 145 CKMISGHIRPNHFSFSSVLKACGNL 169



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/85 (31%), Positives = 58/85 (68%)
 Frame = -2

Query: 302 CIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMSET 123
           C+GN+LISMY+R G ++ A + F+ +   N++S+ +++ G+AK+  +  A  +F+++++T
Sbjct: 192 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 251

Query: 122 GIKPNEVTYIAVLSACSHVGMVAEG 48
           GI  +  T+ ++LS  + +G + +G
Sbjct: 252 GIGISAFTFASLLSGAASIGAMGKG 276



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/67 (44%), Positives = 47/67 (70%)
 Frame = -2

Query: 248 ASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMSETGIKPNEVTYIAVLSACSH 69
           A +VF++M   N+++WT MIT FA+ G AR A+++F  M  +G  P+  TY +VLSAC+ 
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 68  VGMVAEG 48
           +G++A G
Sbjct: 64  LGLLALG 70


>emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/102 (79%), Positives = 91/102 (89%)
 Frame = -2

Query: 308 DQCIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMS 129
           +QCI NALISMYSRCGNI+AA QVFNEM   NVISWTSMITGFAKHG+A RALE+FHKM 
Sbjct: 296 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 355

Query: 128 ETGIKPNEVTYIAVLSACSHVGMVAEGWEHFNSMHKVHNIVP 3
           ETG KPNE+TY+AVLSACSHVGM++EG +HFNSM+K H IVP
Sbjct: 356 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 397



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/85 (38%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
 Frame = -2

Query: 308 DQCIGNALISMYSRC---GNIDAASQVFNEMAITNVISWTSMITGFAKHGYA-RRALEIF 141
           D C+G +L+ MY++C   G++D + +VF +M   NV+SWT++IT +A+ G   + A+E+F
Sbjct: 90  DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELF 149

Query: 140 HKMSETGIKPNEVTYIAVLSACSHV 66
            KM    I+PN  ++ +VL AC ++
Sbjct: 150 CKMISGHIRPNHFSFSSVLKACGNL 174



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/85 (31%), Positives = 58/85 (68%)
 Frame = -2

Query: 302 CIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMSET 123
           C+GN+LISMY+R G ++ A + F+ +   N++S+ +++ G+AK+  +  A  +F+++++T
Sbjct: 197 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 256

Query: 122 GIKPNEVTYIAVLSACSHVGMVAEG 48
           GI  +  T+ ++LS  + +G + +G
Sbjct: 257 GIGISAFTFASLLSGAASIGAMGKG 281



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/67 (44%), Positives = 47/67 (70%)
 Frame = -2

Query: 248 ASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMSETGIKPNEVTYIAVLSACSH 69
           A +VF++M   N+++WT MIT FA+ G AR A+++F  M  +G  P+  TY +VLSAC+ 
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 68  VGMVAEG 48
           +G++A G
Sbjct: 69  LGLLALG 75


>emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/102 (79%), Positives = 91/102 (89%)
 Frame = -2

Query: 308 DQCIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMS 129
           +QCI NALISMYSRCGNI+AA QVFNEM   NVISWTSMITGFAKHG+A RALE+FHKM 
Sbjct: 159 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 218

Query: 128 ETGIKPNEVTYIAVLSACSHVGMVAEGWEHFNSMHKVHNIVP 3
           ETG KPNE+TY+AVLSACSHVGM++EG +HFNSM+K H IVP
Sbjct: 219 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 260



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/85 (31%), Positives = 58/85 (68%)
 Frame = -2

Query: 302 CIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMSET 123
           C+GN+LISMY+R G ++ A + F+ +   N++S+ +++ G+AK+  +  A  +F+++++T
Sbjct: 60  CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 119

Query: 122 GIKPNEVTYIAVLSACSHVGMVAEG 48
           GI  +  T+ ++LS  + +G + +G
Sbjct: 120 GIGISAFTFASLLSGAASIGAMGKG 144


>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/102 (79%), Positives = 91/102 (89%)
 Frame = -2

Query: 308 DQCIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMS 129
           +QCI NALISMYSRCGNI+AA QVFNEM   NVISWTSMITGFAKHG+A RALE+FHKM 
Sbjct: 489 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 548

Query: 128 ETGIKPNEVTYIAVLSACSHVGMVAEGWEHFNSMHKVHNIVP 3
           ETG KPNE+TY+AVLSACSHVGM++EG +HFNSM+K H IVP
Sbjct: 549 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 590



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = -2

Query: 308 DQCIGNALISMYSR-CGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKM 132
           D C+G  LI M+ +  G++ +A +VF++M   N+++WT MIT FA+ G AR A+++F  M
Sbjct: 181 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 240

Query: 131 SETGIKPNEVTYIAVLSACSHVGMVAEG 48
             +G  P+  TY +VLSAC+ +G++A G
Sbjct: 241 ELSGYVPDRFTYSSVLSACTELGLLALG 268



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
 Frame = -2

Query: 308 DQCIGNALISMYSRC---GNIDAASQVFNEMAITNVISWTSMITGFAKHGYA-RRALEIF 141
           D C+G +L+ MY++C   G++D + +VF +M   NV+SWT++IT + + G   + A+E+F
Sbjct: 283 DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELF 342

Query: 140 HKMSETGIKPNEVTYIAVLSACSHV 66
            KM    I+PN  ++ +VL AC ++
Sbjct: 343 CKMISGHIRPNHFSFSSVLKACGNL 367



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/85 (31%), Positives = 58/85 (68%)
 Frame = -2

Query: 302 CIGNALISMYSRCGNIDAASQVFNEMAITNVISWTSMITGFAKHGYARRALEIFHKMSET 123
           C+GN+LISMY+R G ++ A + F+ +   N++S+ +++ G+AK+  +  A  +F+++++T
Sbjct: 390 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 449

Query: 122 GIKPNEVTYIAVLSACSHVGMVAEG 48
           GI  +  T+ ++LS  + +G + +G
Sbjct: 450 GIGISAFTFASLLSGAASIGAMGKG 474



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -2

Query: 308 DQCIGNALISMYSRCGNIDAASQVFNEMAIT-NVISWTSMITGFAKHGYARRALEIFHKM 132
           D  + N LIS+YS+CG+ + A  +F  M    +++SW++M++ FA +    +A+  F  M
Sbjct: 78  DSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM 137

Query: 131 SETGIKPNEVTYIAVLSACSH 69
            E G  PNE  + AV+ ACS+
Sbjct: 138 LELGFYPNEYCFAAVIRACSN 158