BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039907
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-11
ref|XP_003623090.1| F-box protein [Medicago truncatula] gi|35549...    58   9e-10
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    59   9e-10
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    56   2e-09
ref|XP_002466739.1| hypothetical protein SORBIDRAFT_01g013220 [S...    59   4e-09

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 57.8 bits (138), Expect(2) = 4e-11
 Identities = 28/63 (44%), Positives = 37/63 (58%)
 Frame = -3

Query: 386 LPHEIMLHLLSRLPVKSLIRFRCVSKSWHGLVLDPFFSNMHFNRSKQXXXXXNVKTKLML 207
           LP EI+  +LSRLPVK L+RF+CVSK+W  L+  P F   H  R+K+     + K  L  
Sbjct: 8   LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFLST 67

Query: 206 RSH 198
             H
Sbjct: 68  DPH 70



 Score = 34.7 bits (78), Expect(2) = 4e-11
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 112 KIWGSCNGLLLTSHYDEHPLYLWNPSIMVYRKVA 11
           +I GSCNGL+    +D   +Y+WNPS    R++A
Sbjct: 103 EILGSCNGLVCGLIHDNPLIYIWNPSTRESRELA 136


>ref|XP_003623090.1| F-box protein [Medicago truncatula] gi|355498105|gb|AES79308.1|
           F-box protein [Medicago truncatula]
          Length = 385

 Score = 58.2 bits (139), Expect(2) = 9e-10
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = -3

Query: 386 LPHEIMLHLLSRLPVKSLIRFRCVSKSWHGLVLDPFFSNMHFNRSKQXXXXXNVKTKLML 207
           LP E+++ +LS LPVKSL+R +CVSKSW  L+ +P F+ +H NR+ Q      V+T +  
Sbjct: 13  LPGELIVEVLSFLPVKSLMRLKCVSKSWKYLISEPSFAKLHLNRTTQ----DAVRTIVSY 68

Query: 206 RSHS 195
             HS
Sbjct: 69  HMHS 72



 Score = 29.6 bits (65), Expect(2) = 9e-10
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
 Frame = -1

Query: 193 TVFTCLTTKDLIIRPDISVAR*FND--CTKIWGSCNGLLL----------TSHYDEHPLY 50
           TVF  L    +II    +     ND  C  I GSCNGLL              Y E+ L 
Sbjct: 78  TVFRLLENPPIIINLPKNPYHQLNDKDCHYIVGSCNGLLCLFGGTGYREDNGGYRENWLR 137

Query: 49  LWNPSIMV 26
            WNP+  +
Sbjct: 138 FWNPATRI 145


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 59.3 bits (142), Expect(2) = 9e-10
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
 Frame = -3

Query: 386 LPHEIMLHLLSRLPVKSLIRFRCVSKSWHGLVLDPFFSNMHFNRSKQXXXXXNVKTKLML 207
           +P EI++ +L RLPVKSL+++RCV +SWH L+ +  F + H N S +     +    +  
Sbjct: 5   IPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYALVKQ 64

Query: 206 RSHSDC-----LYLFDYEGSD 159
           +S  DC     LY+ D  G +
Sbjct: 65  KSVPDCKERFILYIDDDSGDE 85



 Score = 28.5 bits (62), Expect(2) = 9e-10
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 112 KIWGSCNGLLLTSHYDEHPLYLWNPSI 32
           +I  SCNGL+  S       YLWNP I
Sbjct: 104 EIISSCNGLVCLSDSQYARFYLWNPVI 130


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 55.8 bits (133), Expect(2) = 2e-09
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = -3

Query: 398 ISNVLPHEIMLHLLSRLPVKSLIRFRCVSKSWHGLVLDPFFSNMHFNRSKQXXXXXNVKT 219
           +S+ LP E++  +LSRLP KSL+RFR  SKSW  L+    F+++H +RS          T
Sbjct: 1   MSDHLPREVVTDILSRLPAKSLLRFRSTSKSWKSLIDSQHFNSVHLSRSLSLTS----NT 56

Query: 218 KLMLRSHSD 192
            L+LR  SD
Sbjct: 57  TLILRLDSD 65



 Score = 31.2 bits (69), Expect(2) = 2e-09
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -1

Query: 103 GSCNGLLLTSHYDEHPLYLWNPSIMVYRKVARLP 2
           GSCNGLL  S+  +  +  WNPS+  +R +  LP
Sbjct: 95  GSCNGLLCISNVAD-DIAFWNPSLRQHRILPSLP 127


>ref|XP_002466739.1| hypothetical protein SORBIDRAFT_01g013220 [Sorghum bicolor]
           gi|241920593|gb|EER93737.1| hypothetical protein
           SORBIDRAFT_01g013220 [Sorghum bicolor]
          Length = 810

 Score = 59.3 bits (142), Expect(2) = 4e-09
 Identities = 32/88 (36%), Positives = 44/88 (50%)
 Frame = -3

Query: 395 SNVLPHEIMLHLLSRLPVKSLIRFRCVSKSWHGLVLDPFFSNMHFNRSKQXXXXXNVKTK 216
           ++ LP EI+  +L+RLP KSL RF+CVS+SWHGL+  P F  +H +R         V+  
Sbjct: 58  ASALPDEIVEEILARLPAKSLRRFQCVSRSWHGLITSPPFRQLHSSRRASQPRGLFVRPA 117

Query: 215 LMLRSHSDCLYLFDYEGSDHQARYISSP 132
                         Y GS H  R +  P
Sbjct: 118 -------------GYVGSFHACRQLGCP 132



 Score = 26.2 bits (56), Expect(2) = 4e-09
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 97  CNGLLLTSHYDEHPLYLWNPS 35
           C+GL+L    D    Y+WNPS
Sbjct: 158 CHGLVLLCSLDYSAHYVWNPS 178