BLASTX nr result

ID: Cimicifuga21_contig00039862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039862
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL52489.1| unknown [Zea mays] gi|414872548|tpg|DAA51105.1| T...    75   4e-12
gb|ACG43042.1| serine/threonine-protein kinase bur1 [Zea mays]         75   4e-12
ref|NP_001145736.1| uncharacterized protein LOC100279243 [Zea ma...    75   4e-12
ref|XP_002272429.1| PREDICTED: cyclin-dependent kinase C-1-like ...    75   6e-12
ref|XP_002466536.1| hypothetical protein SORBIDRAFT_01g009600 [S...    74   2e-11

>gb|ACL52489.1| unknown [Zea mays] gi|414872548|tpg|DAA51105.1| TPA: putative
           cyclin-dependent protein kinase C family protein [Zea
           mays]
          Length = 287

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/99 (49%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
 Frame = -3

Query: 243 HQQFLPGVLYRPMHISHHPPVVAGLGHLY---RPSGWPSIYPLGGNAGGGYNPI------ 91
           H Q  PG   + MH  + PPV AG GH Y   R  G P+ YP GGN GGGYNP       
Sbjct: 163 HPQMRPG---QGMH--NVPPVAAGPGHHYAKPRGPGGPNRYPQGGNQGGGYNPNRGGQGG 217

Query: 90  ---SGPYPPQGLGRPY------APSGMRPYGAGGPNYPQ 1
              SGPYP QG G PY        SG   YGAGGPNY Q
Sbjct: 218 GYGSGPYPQQGRGPPYPGAAGPRGSGGSGYGAGGPNYQQ 256


>gb|ACG43042.1| serine/threonine-protein kinase bur1 [Zea mays]
          Length = 510

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/99 (49%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
 Frame = -3

Query: 243 HQQFLPGVLYRPMHISHHPPVVAGLGHLY---RPSGWPSIYPLGGNAGGGYNPI------ 91
           H Q  PG   + MH  + PPV AG GH Y   R  G P+ YP GGN GGGYNP       
Sbjct: 386 HPQMRPG---QGMH--NVPPVAAGPGHHYAKPRGPGGPNRYPQGGNQGGGYNPNRGGQGG 440

Query: 90  ---SGPYPPQGLGRPY------APSGMRPYGAGGPNYPQ 1
              SGPYP QG G PY        SG   YGAGGPNY Q
Sbjct: 441 GYGSGPYPQQGRGPPYPGAAGPRGSGGSGYGAGGPNYQQ 479


>ref|NP_001145736.1| uncharacterized protein LOC100279243 [Zea mays]
           gi|194689324|gb|ACF78746.1| unknown [Zea mays]
           gi|194697106|gb|ACF82637.1| unknown [Zea mays]
           gi|194707812|gb|ACF87990.1| unknown [Zea mays]
           gi|238010032|gb|ACR36051.1| unknown [Zea mays]
           gi|414872547|tpg|DAA51104.1| TPA: putative
           cyclin-dependent protein kinase C family protein [Zea
           mays]
          Length = 510

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/99 (49%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
 Frame = -3

Query: 243 HQQFLPGVLYRPMHISHHPPVVAGLGHLY---RPSGWPSIYPLGGNAGGGYNPI------ 91
           H Q  PG   + MH  + PPV AG GH Y   R  G P+ YP GGN GGGYNP       
Sbjct: 386 HPQMRPG---QGMH--NVPPVAAGPGHHYAKPRGPGGPNRYPQGGNQGGGYNPNRGGQGG 440

Query: 90  ---SGPYPPQGLGRPY------APSGMRPYGAGGPNYPQ 1
              SGPYP QG G PY        SG   YGAGGPNY Q
Sbjct: 441 GYGSGPYPQQGRGPPYPGAAGPRGSGGSGYGAGGPNYQQ 479


>ref|XP_002272429.1| PREDICTED: cyclin-dependent kinase C-1-like [Vitis vinifera]
          Length = 517

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/96 (45%), Positives = 47/96 (48%), Gaps = 25/96 (26%)
 Frame = -3

Query: 213 RPMHISHHPPVVAGLGHLYR----PSGWPSIYPLGGNAGGGYNPIS------------GP 82
           +PMH    PPV AG  H Y     PSG PS YP  GN  GGYN  +            GP
Sbjct: 394 QPMHGGSQPPVAAGPSHHYGKPRGPSGGPSRYPQSGNPSGGYNHPNRGGQGGGGGYGNGP 453

Query: 81  YPPQGLGRPYAPSGM---------RPYGAGGPNYPQ 1
           +PPQG G PYA SGM           YG G PNYPQ
Sbjct: 454 FPPQGRGPPYASSGMPGAGPRGGGSGYGVGAPNYPQ 489


>ref|XP_002466536.1| hypothetical protein SORBIDRAFT_01g009600 [Sorghum bicolor]
           gi|241920390|gb|EER93534.1| hypothetical protein
           SORBIDRAFT_01g009600 [Sorghum bicolor]
          Length = 512

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 49/104 (47%), Positives = 50/104 (48%), Gaps = 23/104 (22%)
 Frame = -3

Query: 243 HQQFLPGVLYRPMHISHHPPVVAGLGHLY---RPSGWPSIYPLGGNAGGGYNPI------ 91
           H Q  PG     MH  + PPV AG GH Y   R  G PS YP GGN GGGYNP       
Sbjct: 386 HPQIRPG-----MH--NVPPVAAGPGHHYAKPRGPGGPSRYPQGGNQGGGYNPNRGGQGG 438

Query: 90  ---SGPYPPQGLGRPYAPSGM-----------RPYGAGGPNYPQ 1
              SGPYP QG G PY   GM             YGA GPNY Q
Sbjct: 439 GYGSGPYPQQGRGPPYPGGGMGGAAGPRGSGASGYGASGPNYQQ 482


Top