BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039861
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...    84   2e-14
dbj|BAF00669.1| retrotransposon like protein [Arabidopsis thaliana]    84   2e-14
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...    84   2e-14
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          82   3e-14
dbj|BAD44345.1| retrotransposon like protein [Arabidopsis thaliana]    82   4e-14

>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = -1

Query: 295 SCQICHHTGHTTLQCPQRFNQTHQSGDLPQSFAAMSM-DSSPLDTH-WYPDTGATNHMTS 122
           +CQIC   GH+  +C  RF + +   DLP +FAAM + D +   +H W PD+ AT H+T+
Sbjct: 280 TCQICRKYGHSAFKCYTRFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITN 339

Query: 121 DAASLTNKTDYVDTDQIVIGNGNSVPINHIGNISL 17
               L N   Y   D +++GNG+ +PI HIG I L
Sbjct: 340 TTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPL 374


>dbj|BAF00669.1| retrotransposon like protein [Arabidopsis thaliana]
          Length = 392

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = -1

Query: 295 SCQICHHTGHTTLQCPQRFNQTHQSGDLPQSFAAMSM-DSSPLDTH-WYPDTGATNHMTS 122
           +CQIC   GH+  +C  RF + +   DLP +FAAM + D +   +H W PD+ AT H+T+
Sbjct: 280 TCQICRKYGHSAFKCYTRFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITN 339

Query: 121 DAASLTNKTDYVDTDQIVIGNGNSVPINHIGNISL 17
               L N   Y   D +++GNG+ +PI HIG I L
Sbjct: 340 TTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPL 374


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7267767|emb|CAB81170.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1515

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = -1

Query: 295 SCQICHHTGHTTLQCPQRFNQTHQSGDLPQSFAAMSM-DSSPLDTH-WYPDTGATNHMTS 122
           +CQIC   GH+  +C  RF + +   DLP +FAAM + D +   +H W PD+ AT H+T+
Sbjct: 277 TCQICRKYGHSAFKCYTRFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITN 336

Query: 121 DAASLTNKTDYVDTDQIVIGNGNSVPINHIGNISL 17
               L N   Y   D +++GNG+ +PI HIG I L
Sbjct: 337 TTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPL 371


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/100 (37%), Positives = 59/100 (59%)
 Frame = -1

Query: 316 PNDQIRISCQICHHTGHTTLQCPQRFNQTHQSGDLPQSFAAMSMDSSPLDTHWYPDTGAT 137
           P+   R  CQIC   GHT ++C  RF+  +QS    Q+F+A+ + S      WYPD+ AT
Sbjct: 273 PSSGQRPVCQICGRIGHTAIKCYNRFDNNYQSEVPTQAFSALRV-SDETGKEWYPDSAAT 331

Query: 136 NHMTSDAASLTNKTDYVDTDQIVIGNGNSVPINHIGNISL 17
            H+T+  + L N T Y   D +++G+G  +PI H+G+ ++
Sbjct: 332 AHITASTSGLQNATTYEGNDAVLVGDGTYLPITHVGSTTI 371


>dbj|BAD44345.1| retrotransposon like protein [Arabidopsis thaliana]
          Length = 383

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
 Frame = -1

Query: 295 SCQICHHTGHTTLQCPQRFNQTHQSGDLPQSFAAMSM-DSSPLDTH-WYPDTGATNHMTS 122
           +CQIC   GH+  +C  RF + +   DLP +FAAM + D +   +H W PD+ AT H+T+
Sbjct: 280 TCQICRKYGHSAFKCYTRFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITN 339

Query: 121 DAASLTNKTDYVDTDQIVIGNGNSVPINHIGNISLPT 11
               L N   Y   D +++GNG+ +PI HIG  +  T
Sbjct: 340 TTDGLQNSQTYSGDDSVIVGNGDFLPITHIGQTNTTT 376