BLASTX nr result

ID: Cimicifuga21_contig00039765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039765
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61825.1| hypothetical protein VITISV_027627 [Vitis vinifera]    92   4e-17
ref|XP_002274634.1| PREDICTED: uncharacterized protein LOC100255...    91   7e-17
emb|CBI38357.3| unnamed protein product [Vitis vinifera]               90   2e-16
emb|CBI38355.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002307232.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16

>emb|CAN61825.1| hypothetical protein VITISV_027627 [Vitis vinifera]
          Length = 163

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
 Frame = -2

Query: 432 PVKVSNLLQKHPSSFICNSDEMEFEDFVSAMRADEELLPGHLYFSLPLSMLRYPLQPEEM 253
           PVKVS +LQK+PS FICNSDEM+F+D VSA+  DEEL PG LYF+LPLS L+ PLQ EEM
Sbjct: 30  PVKVSYVLQKNPSCFICNSDEMDFDDVVSAIHDDEELQPGQLYFALPLSRLKQPLQAEEM 89

Query: 252 XXXXXXXXXXXXXSGTGGGD----------PILYTGCNGKGRQRLSGDVCTVGGGVKKTR 103
                            GGD          P+++    G+   + SG V   GG     R
Sbjct: 90  AALAVKASSALM---KSGGDKCRCRRKSLSPVMF---XGEKDSKSSGRVAPGGGVEGGLR 143

Query: 102 SSCKGRVRNLTSNKLTVIPE 43
               G  R  ++  L+ IPE
Sbjct: 144 RGRNGGGRRNSARLLSSIPE 163


>ref|XP_002274634.1| PREDICTED: uncharacterized protein LOC100255767 [Vitis vinifera]
          Length = 163

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
 Frame = -2

Query: 432 PVKVSNLLQKHPSSFICNSDEMEFEDFVSAMRADEELLPGHLYFSLPLSMLRYPLQPEEM 253
           PVKVS +LQK+PS FICNSDEM+F+D VSA+  DEEL PG LYF+LPLS L+ PLQ EEM
Sbjct: 30  PVKVSYVLQKNPSCFICNSDEMDFDDVVSAIHDDEELQPGQLYFALPLSRLKQPLQAEEM 89

Query: 252 XXXXXXXXXXXXXSGTGGGD----------PILYTGCNGKGRQRLSGDVCTVGGGVKKTR 103
                            GGD          P ++   +G+   + SG V   GG     R
Sbjct: 90  AALAVKASSALM---KSGGDKCRCRRKSLSPAMF---SGEKDSKSSGRVAPGGGVEGGLR 143

Query: 102 SSCKGRVRNLTSNKLTVIPE 43
               G  R  ++  L+ IPE
Sbjct: 144 RGRNGGGRRNSARLLSSIPE 163


>emb|CBI38357.3| unnamed protein product [Vitis vinifera]
          Length = 304

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/60 (71%), Positives = 50/60 (83%)
 Frame = -2

Query: 432 PVKVSNLLQKHPSSFICNSDEMEFEDFVSAMRADEELLPGHLYFSLPLSMLRYPLQPEEM 253
           PVKVS +LQK+PS FICNSDEM+F+D VSA+  DEEL PG LYF+LPLS L+ PLQ EEM
Sbjct: 30  PVKVSYVLQKNPSCFICNSDEMDFDDVVSAIHDDEELQPGQLYFALPLSRLKQPLQAEEM 89


>emb|CBI38355.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/60 (71%), Positives = 50/60 (83%)
 Frame = -2

Query: 432 PVKVSNLLQKHPSSFICNSDEMEFEDFVSAMRADEELLPGHLYFSLPLSMLRYPLQPEEM 253
           PVKVS +LQK+PS FICNSDEM+F+D VSA+  DEEL PG LYF+LPLS L+ PLQ EEM
Sbjct: 30  PVKVSYVLQKNPSCFICNSDEMDFDDVVSAIHDDEELQPGQLYFALPLSRLKQPLQAEEM 89


>ref|XP_002307232.1| predicted protein [Populus trichocarpa] gi|222856681|gb|EEE94228.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/60 (68%), Positives = 51/60 (85%)
 Frame = -2

Query: 432 PVKVSNLLQKHPSSFICNSDEMEFEDFVSAMRADEELLPGHLYFSLPLSMLRYPLQPEEM 253
           PVKVS +L K+P+ FICN+DEMEF+D VSA+  DEEL PG LYF+LPLS L++PLQPE+M
Sbjct: 30  PVKVSYVLAKNPTCFICNADEMEFDDVVSAINDDEELQPGQLYFALPLSWLKHPLQPEQM 89


Top