BLASTX nr result
ID: Cimicifuga21_contig00039733
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00039733 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago t... 84 1e-14 gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x... 84 2e-14 gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indi... 84 2e-14 gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subc... 84 2e-14 ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group] g... 84 2e-14 >ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula] gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula] Length = 161 Score = 84.0 bits (206), Expect = 1e-14 Identities = 38/44 (86%), Positives = 42/44 (95%) Frame = -2 Query: 134 MSDVEYRCFVGGLAWATDDHSLEKAFSTYGDIVDSKIINDRETG 3 M+DVEYRCFVGGLAWATD+ +LEKAFS YG+IVDSKIINDRETG Sbjct: 1 MADVEYRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETG 44 >gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum] gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum] Length = 166 Score = 83.6 bits (205), Expect = 2e-14 Identities = 36/43 (83%), Positives = 42/43 (97%) Frame = -2 Query: 131 SDVEYRCFVGGLAWATDDHSLEKAFSTYGDIVDSKIINDRETG 3 +DVEYRCFVGGLAWATDDH+LE+AFS YG++V+SKIINDRETG Sbjct: 4 ADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETG 46 >gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group] Length = 139 Score = 83.6 bits (205), Expect = 2e-14 Identities = 38/42 (90%), Positives = 40/42 (95%) Frame = -2 Query: 128 DVEYRCFVGGLAWATDDHSLEKAFSTYGDIVDSKIINDRETG 3 DVEYRCFVGGLAWATDD SLE AFSTYG+I+DSKIINDRETG Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETG 46 >gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed [Oryza sativa Japonica Group] Length = 153 Score = 83.6 bits (205), Expect = 2e-14 Identities = 38/42 (90%), Positives = 40/42 (95%) Frame = -2 Query: 128 DVEYRCFVGGLAWATDDHSLEKAFSTYGDIVDSKIINDRETG 3 DVEYRCFVGGLAWATDD SLE AFSTYG+I+DSKIINDRETG Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETG 46 >ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group] gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed [Oryza sativa Japonica Group] gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group] Length = 196 Score = 83.6 bits (205), Expect = 2e-14 Identities = 38/42 (90%), Positives = 40/42 (95%) Frame = -2 Query: 128 DVEYRCFVGGLAWATDDHSLEKAFSTYGDIVDSKIINDRETG 3 DVEYRCFVGGLAWATDD SLE AFSTYG+I+DSKIINDRETG Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETG 46