BLASTX nr result

ID: Cimicifuga21_contig00039469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039469
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258...   132   3e-29
emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]   132   3e-29
ref|XP_002316042.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002519223.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_002466539.1| hypothetical protein SORBIDRAFT_01g009630 [S...    91   1e-16

>ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258583 [Vitis vinifera]
           gi|296083247|emb|CBI22883.3| unnamed protein product
           [Vitis vinifera]
          Length = 1300

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/120 (53%), Positives = 81/120 (67%), Gaps = 11/120 (9%)
 Frame = +3

Query: 27  YYMQHYSQYKYVRPHGVGYPFNTKINGS-----------RCDWDANGCNQHLGSSLGTVA 173
           Y++Q +SQYKY+R H   +P N K NG+           R DW+ NG NQH GSS   +A
Sbjct: 130 YHLQ-FSQYKYIRSHSTVFPSNAKANGTAKVASFSSMLARGDWEENGSNQHKGSSSVEIA 188

Query: 174 SSGSTTLLVTGQTGCDFSLPRNRTILDVNIDTFEQKPWKHPGADISDFFNFGFDEESWKH 353
           S+ +    +  Q G  FSLP  RTILDVNIDTFEQKPW+HPG D++DFFNFGF+EE+WK+
Sbjct: 189 STHTRAAPLVAQGGYGFSLPWYRTILDVNIDTFEQKPWRHPGVDLTDFFNFGFNEETWKN 248


>emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]
          Length = 1338

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/120 (53%), Positives = 81/120 (67%), Gaps = 11/120 (9%)
 Frame = +3

Query: 27  YYMQHYSQYKYVRPHGVGYPFNTKINGS-----------RCDWDANGCNQHLGSSLGTVA 173
           Y++Q +SQYKY+R H   +P N K NG+           R DW+ NG NQH GSS   +A
Sbjct: 130 YHLQ-FSQYKYIRSHSTVFPSNAKANGTAKVASFSSMLARGDWEENGSNQHKGSSSVEIA 188

Query: 174 SSGSTTLLVTGQTGCDFSLPRNRTILDVNIDTFEQKPWKHPGADISDFFNFGFDEESWKH 353
           S+ +    +  Q G  FSLP  RTILDVNIDTFEQKPW+HPG D++DFFNFGF+EE+WK+
Sbjct: 189 STHTRAAPLVAQGGYGFSLPWYRTILDVNIDTFEQKPWRHPGVDLTDFFNFGFNEETWKN 248


>ref|XP_002316042.1| predicted protein [Populus trichocarpa] gi|222865082|gb|EEF02213.1|
           predicted protein [Populus trichocarpa]
          Length = 1253

 Score =  105 bits (262), Expect = 4e-21
 Identities = 58/124 (46%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
 Frame = +3

Query: 12  IKGNHYYMQHYSQYKYVRPHGVGYPFNTKINGS-----------RCDWDANGCNQHLGSS 158
           +KG H+    +  YK VRP+G  +P N K N S           R +W+ N C QH  +S
Sbjct: 142 VKGIHHLP--HLHYKNVRPYGSSFPSNKKGNESAGVAFRSSSSARGNWEDNRCKQHKVNS 199

Query: 159 LGTVASSGSTTLLVTGQTGCDFSLPRNRTILDVNIDTFEQKPWKHPGADISDFFNFGFDE 338
            G VA+  +TT  V    G  +SLP  R+ILDVNID FE+K W++PG DIS+FFNFGF+E
Sbjct: 200 -GRVANFHATTNSVLSHGGYGYSLPWYRSILDVNIDAFEEKQWRYPGVDISNFFNFGFNE 258

Query: 339 ESWK 350
           +SWK
Sbjct: 259 DSWK 262


>ref|XP_002519223.1| conserved hypothetical protein [Ricinus communis]
           gi|223541538|gb|EEF43087.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1155

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
 Frame = +3

Query: 54  KYVRPHGVGYPFNTKINGS-----------RCDWDANGCNQHLGSSLGTVASSGSTTLLV 200
           K+V+P+G  +P N K+N S           R +W+ +    H  SS G  AS  +    V
Sbjct: 109 KHVKPYGSSFPSNKKVNDSVSVKSCSSIYSRGNWEDDRYKLHEVSSTGPAASVHAAGSSV 168

Query: 201 TGQTGCDFSLPRNRTILDVNIDTFEQKPWKHPGADISDFFNFGFDEESWK 350
               G  +SLP  RTILDV+ID FE+K W+ PG D+SDFFNFGF+E+SWK
Sbjct: 169 GSHGGYCYSLPWYRTILDVDIDAFEEKRWRCPGVDVSDFFNFGFNEDSWK 218


>ref|XP_002466539.1| hypothetical protein SORBIDRAFT_01g009630 [Sorghum bicolor]
           gi|241920393|gb|EER93537.1| hypothetical protein
           SORBIDRAFT_01g009630 [Sorghum bicolor]
          Length = 685

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 52/131 (39%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
 Frame = +3

Query: 18  GNHYYMQHYSQYKYVRPHGVGY-------------------PFNTKINGSRCDWDANGCN 140
           G  ++ QH+S +KYVRP   G                    PF+ +  G        G N
Sbjct: 226 GPGFHQQHHSMFKYVRPGAPGASVGGVPGGPGQFRPPGPSGPFSGRGRGDWRPAAGRGMN 285

Query: 141 QHLGSSLGTVASSGSTTLLVTGQTGCDFSLPRNRTILDVNIDT-FEQKPWKHPGADISDF 317
           +   S  G     GS      G  G DF+LP ++TI D++++T FE+KPWK PGADISDF
Sbjct: 286 KSFHSGYGITPWGGSGR----GFGGLDFALPPHKTIFDIDVETAFEEKPWKFPGADISDF 341

Query: 318 FNFGFDEESWK 350
           FNFG DEE WK
Sbjct: 342 FNFGLDEEKWK 352


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