BLASTX nr result

ID: Cimicifuga21_contig00039433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039433
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308572.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43
ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sat...   156   1e-36
gb|EEE66614.1| hypothetical protein OsJ_23194 [Oryza sativa Japo...   156   1e-36

>ref|XP_002308572.1| predicted protein [Populus trichocarpa] gi|222854548|gb|EEE92095.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/114 (76%), Positives = 99/114 (86%)
 Frame = -3

Query: 342 LLEAQGNVHRFIAGDREHQSSPEIYKMLKVIERRLTEAGYSPDISPVLHDIGEEEKEIAI 163
           L+EA+G VHRF+AG REH+ S EI KML++IE RL  AGY P++SPVLHDIGEEEKE AI
Sbjct: 303 LIEARGKVHRFVAGHREHEQSLEIQKMLEIIETRLAAAGYVPNVSPVLHDIGEEEKENAI 362

Query: 162 RVHSERLAIAFGLLVTKDGDCIRIVKNLRVCGDCHKVFKMISKVFQREIIVRDG 1
           +VHSERLAIAFGLLVT  G CIRIVKNLRVC DCH+V KMIS+VF+REIIVRDG
Sbjct: 363 KVHSERLAIAFGLLVTGPGSCIRIVKNLRVCWDCHEVTKMISRVFEREIIVRDG 416


>ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449479547|ref|XP_004155632.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 638

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/114 (72%), Positives = 100/114 (87%)
 Frame = -3

Query: 342 LLEAQGNVHRFIAGDREHQSSPEIYKMLKVIERRLTEAGYSPDISPVLHDIGEEEKEIAI 163
           L+EA+G VHRF+AGD+EH+ + EIYKML+++  R+  AGYS ++S VLHDI EEEKE AI
Sbjct: 508 LIEAEGRVHRFVAGDKEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEEEKENAI 567

Query: 162 RVHSERLAIAFGLLVTKDGDCIRIVKNLRVCGDCHKVFKMISKVFQREIIVRDG 1
           + HSERLAIAFGLLVTKDGDCIRI+KNLRVCGDCH+V K+IS VF+REIIVRDG
Sbjct: 568 KEHSERLAIAFGLLVTKDGDCIRIIKNLRVCGDCHEVSKIISLVFEREIIVRDG 621


>ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Brachypodium distachyon]
          Length = 635

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/114 (66%), Positives = 95/114 (83%)
 Frame = -3

Query: 342 LLEAQGNVHRFIAGDREHQSSPEIYKMLKVIERRLTEAGYSPDISPVLHDIGEEEKEIAI 163
           L+EAQGN+H+F+ GD +H+ S +IY ML +I RRL +AGY PD+S VLHDIG+EEK  AI
Sbjct: 505 LMEAQGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDIGDEEKVHAI 564

Query: 162 RVHSERLAIAFGLLVTKDGDCIRIVKNLRVCGDCHKVFKMISKVFQREIIVRDG 1
           +VHSERLAIA+G +VT+ G  IRIVKNL+VCGDCH+  KM++KVF REIIVRDG
Sbjct: 565 KVHSERLAIAYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFNREIIVRDG 618


>dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
          Length = 681

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/114 (65%), Positives = 91/114 (79%)
 Frame = -3

Query: 342 LLEAQGNVHRFIAGDREHQSSPEIYKMLKVIERRLTEAGYSPDISPVLHDIGEEEKEIAI 163
           L+EA G VH+F+ GD  H+ S +IY  L +I +RLTEAGY PD+S VLHDIGEEEK  A+
Sbjct: 521 LMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAV 580

Query: 162 RVHSERLAIAFGLLVTKDGDCIRIVKNLRVCGDCHKVFKMISKVFQREIIVRDG 1
           +VHSERLAIA+G +V + G  IRIVKNLRVCGDCH+  KM++ VFQREIIVRDG
Sbjct: 581 KVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRDG 634


>gb|EEE66614.1| hypothetical protein OsJ_23194 [Oryza sativa Japonica Group]
          Length = 412

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/114 (65%), Positives = 91/114 (79%)
 Frame = -3

Query: 342 LLEAQGNVHRFIAGDREHQSSPEIYKMLKVIERRLTEAGYSPDISPVLHDIGEEEKEIAI 163
           L+EA G VH+F+ GD  H+ S +IY  L +I +RLTEAGY PD+S VLHDIGEEEK  A+
Sbjct: 252 LMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAV 311

Query: 162 RVHSERLAIAFGLLVTKDGDCIRIVKNLRVCGDCHKVFKMISKVFQREIIVRDG 1
           +VHSERLAIA+G +V + G  IRIVKNLRVCGDCH+  KM++ VFQREIIVRDG
Sbjct: 312 KVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRDG 365


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