BLASTX nr result

ID: Cimicifuga21_contig00039428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039428
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608693.1| Retinoblastoma-binding protein [Medicago tru...   161   6e-38
ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854...   159   3e-37
emb|CBI23464.3| unnamed protein product [Vitis vinifera]              159   3e-37
emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]   159   3e-37
ref|XP_004162336.1| PREDICTED: uncharacterized LOC101222261 [Cuc...   157   7e-37

>ref|XP_003608693.1| Retinoblastoma-binding protein [Medicago truncatula]
           gi|355509748|gb|AES90890.1| Retinoblastoma-binding
           protein [Medicago truncatula]
          Length = 908

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/100 (72%), Positives = 89/100 (89%)
 Frame = -1

Query: 319 VNTEGSYKLSSGVVAVLKPDEATFDRQVEGISSSSRSVRELPPELHCPICKQVMKDAVLT 140
           VN +GSY L +G VAVLKP+EA F++++EG+ S++RSV +LPPELHCP+C  VMKDAVLT
Sbjct: 256 VNPQGSYALPNGSVAVLKPNEAAFEKEMEGMPSTTRSVGDLPPELHCPLCSNVMKDAVLT 315

Query: 139 SKCCFRSFCDKCIRNRVISQSMCLCGATNVLADDLLPNKT 20
           SKCCF+SFCDKCIR+ +IS+SMC+CGA NVLADDLLPNKT
Sbjct: 316 SKCCFKSFCDKCIRDYIISKSMCVCGAMNVLADDLLPNKT 355


>ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854867 [Vitis vinifera]
          Length = 823

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/97 (74%), Positives = 88/97 (90%)
 Frame = -1

Query: 310 EGSYKLSSGVVAVLKPDEATFDRQVEGISSSSRSVRELPPELHCPICKQVMKDAVLTSKC 131
           +GSY L SG VAVLKP+EA F++++EG+ S+ RSV ELPPELHCP+CK+VMKDAVLTSKC
Sbjct: 251 DGSYALPSGAVAVLKPNEAAFEKEIEGLPST-RSVGELPPELHCPLCKEVMKDAVLTSKC 309

Query: 130 CFRSFCDKCIRNRVISQSMCLCGATNVLADDLLPNKT 20
           CF+SFC KCIR+ +IS+SMC+CGATN+LADDLLPNKT
Sbjct: 310 CFKSFCYKCIRDHIISKSMCVCGATNILADDLLPNKT 346


>emb|CBI23464.3| unnamed protein product [Vitis vinifera]
          Length = 828

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/97 (74%), Positives = 88/97 (90%)
 Frame = -1

Query: 310 EGSYKLSSGVVAVLKPDEATFDRQVEGISSSSRSVRELPPELHCPICKQVMKDAVLTSKC 131
           +GSY L SG VAVLKP+EA F++++EG+ S+ RSV ELPPELHCP+CK+VMKDAVLTSKC
Sbjct: 256 DGSYALPSGAVAVLKPNEAAFEKEIEGLPST-RSVGELPPELHCPLCKEVMKDAVLTSKC 314

Query: 130 CFRSFCDKCIRNRVISQSMCLCGATNVLADDLLPNKT 20
           CF+SFC KCIR+ +IS+SMC+CGATN+LADDLLPNKT
Sbjct: 315 CFKSFCYKCIRDHIISKSMCVCGATNILADDLLPNKT 351


>emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]
          Length = 828

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/97 (74%), Positives = 88/97 (90%)
 Frame = -1

Query: 310 EGSYKLSSGVVAVLKPDEATFDRQVEGISSSSRSVRELPPELHCPICKQVMKDAVLTSKC 131
           +GSY L SG VAVLKP+EA F++++EG+ S+ RSV ELPPELHCP+CK+VMKDAVLTSKC
Sbjct: 256 DGSYALPSGAVAVLKPNEAAFEKEIEGLPST-RSVGELPPELHCPLCKEVMKDAVLTSKC 314

Query: 130 CFRSFCDKCIRNRVISQSMCLCGATNVLADDLLPNKT 20
           CF+SFC KCIR+ +IS+SMC+CGATN+LADDLLPNKT
Sbjct: 315 CFKSFCYKCIRDHIISKSMCVCGATNILADDLLPNKT 351


>ref|XP_004162336.1| PREDICTED: uncharacterized LOC101222261 [Cucumis sativus]
          Length = 867

 Score =  157 bits (398), Expect = 7e-37
 Identities = 70/97 (72%), Positives = 88/97 (90%)
 Frame = -1

Query: 310 EGSYKLSSGVVAVLKPDEATFDRQVEGISSSSRSVRELPPELHCPICKQVMKDAVLTSKC 131
           +GSY L SG VAVLKP+EA F++++EG+ S+ RSV +LPPELHCP+CK+VMKDAVLTSKC
Sbjct: 252 DGSYALPSGAVAVLKPNEAAFEKEIEGLPST-RSVGDLPPELHCPLCKEVMKDAVLTSKC 310

Query: 130 CFRSFCDKCIRNRVISQSMCLCGATNVLADDLLPNKT 20
           CF+SFCDKCIR+ +I++S C+CGATN+LADDLLPNKT
Sbjct: 311 CFKSFCDKCIRDHIITKSACVCGATNILADDLLPNKT 347


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