BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039390
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat...   114   1e-23
ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   111   7e-23
ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat...   111   7e-23
ref|XP_002518803.1| pentatricopeptide repeat-containing protein,...   107   8e-22
ref|NP_178323.3| tetratricopeptide repeat-containing protein [Ar...    95   5e-18

>ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/96 (57%), Positives = 72/96 (75%)
 Frame = -2

Query: 289 NKESIHGIVKEDRWEEFRNLGLFDSVLAPIRVSKILIELRDDARLALKFFKWVGKQEGFF 110
           +K+S+  IV+E RW++FR + LFDS LAPI  S++L+EL  DARLAL+FF+W   + GF 
Sbjct: 70  DKDSVREIVREQRWDDFRIVSLFDSALAPIWASRVLVELCQDARLALRFFEWAKGRIGFQ 129

Query: 109 HTTESYCILVHILFRARMYFDAQEALKIMISSRQVL 2
           HT+E+YCILVHILF AR Y DA   LK +I  R+VL
Sbjct: 130 HTSEAYCILVHILFCARFYSDANAVLKELICLRRVL 165


>ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/91 (58%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = -2

Query: 280 SIHGIVKEDRWEEFRNLGLFDSVLAPIRVSKILIELRDDARLALKFFKWVGKQEGFFHTT 101
           S+  I+++D W + + + LFDS LAPI VSKIL+ LR+D +LALKFFKW G Q GF HTT
Sbjct: 45  SLRKIIQQDLWNDPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTT 104

Query: 100 ESYCILVHILFRARMYFDAQEALK-IMISSR 11
           ESYCI+VH++FRARMY DA + +K ++++SR
Sbjct: 105 ESYCIIVHLVFRARMYTDAHDTVKEVIMNSR 135


>ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/91 (58%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = -2

Query: 280 SIHGIVKEDRWEEFRNLGLFDSVLAPIRVSKILIELRDDARLALKFFKWVGKQEGFFHTT 101
           S+  I+++D W + + + LFDS LAPI VSKIL+ LR+D +LALKFFKW G Q GF HTT
Sbjct: 104 SLRKIIQQDLWNDPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTT 163

Query: 100 ESYCILVHILFRARMYFDAQEALK-IMISSR 11
           ESYCI+VH++FRARMY DA + +K ++++SR
Sbjct: 164 ESYCIIVHLVFRARMYTDAHDTVKEVIMNSR 194


>ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542184|gb|EEF43728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 775

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/97 (54%), Positives = 72/97 (74%)
 Frame = -2

Query: 292 LNKESIHGIVKEDRWEEFRNLGLFDSVLAPIRVSKILIELRDDARLALKFFKWVGKQEGF 113
           L+K SI  I+++D+W + + +   DS L PI VS++L+EL+ D +LALKFF+W   + GF
Sbjct: 66  LDKASIIKIIQQDQWNDPKFVRFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKFGF 125

Query: 112 FHTTESYCILVHILFRARMYFDAQEALKIMISSRQVL 2
             TTESYC+LVHILF ARMYFDA   LK +ISSR++L
Sbjct: 126 CLTTESYCLLVHILFYARMYFDANFFLKELISSRRIL 162


>ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546751|sp|P0C894.1|PP143_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At2g02150 gi|330250459|gb|AEC05553.1|
           tetratricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 761

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/93 (48%), Positives = 63/93 (67%)
 Frame = -2

Query: 289 NKESIHGIVKEDRWEEFRNLGLFDSVLAPIRVSKILIELRDDARLALKFFKWVGKQEGFF 110
           +++ I  +V  D W++     LFD  LAPI V ++L+EL++D +LA KFFKW   + GF 
Sbjct: 80  DRDWIRKVVHNDLWDDPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFK 139

Query: 109 HTTESYCILVHILFRARMYFDAQEALKIMISSR 11
           H+ ESYCI+ HILF ARMY+DA   LK M+ S+
Sbjct: 140 HSVESYCIVAHILFCARMYYDANSVLKEMVLSK 172