BLASTX nr result

ID: Cimicifuga21_contig00039388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039388
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P41919.1|RANB1_TOBAC RecName: Full=GTP-binding nuclear protei...    89   3e-16
ref|XP_002285307.1| PREDICTED: GTP-binding nuclear protein Ran-3...    89   3e-16
emb|CBI36254.3| unnamed protein product [Vitis vinifera]               89   3e-16
gb|AAT40986.1| RAN [Nicotiana sylvestris] gi|48249482|gb|AAT4098...    89   3e-16
gb|AAB97312.1| salt stress inducible small GTP binding protein R...    88   6e-16

>sp|P41919.1|RANB1_TOBAC RecName: Full=GTP-binding nuclear protein Ran-B1
           gi|496272|gb|AAA34109.1| small ras-related protein
           [Nicotiana tabacum]
          Length = 221

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   YNFEKPFLYLARKLAGDANLHFVESPALAPPEVSIDMEAQQKHEQE 139
           YNFEKPFLYLARKLAGDANLHFVESPALAPPEV ID+ AQQ HEQE
Sbjct: 158 YNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQLHEQE 203


>ref|XP_002285307.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera]
          Length = 221

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   YNFEKPFLYLARKLAGDANLHFVESPALAPPEVSIDMEAQQKHEQE 139
           YNFEKPFLYLARKLAGDANLHFVESPALAPPEV IDM AQQ+HE E
Sbjct: 158 YNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDMAAQQQHEAE 203


>emb|CBI36254.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   YNFEKPFLYLARKLAGDANLHFVESPALAPPEVSIDMEAQQKHEQE 139
           YNFEKPFLYLARKLAGDANLHFVESPALAPPEV IDM AQQ+HE E
Sbjct: 204 YNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDMAAQQQHEAE 249


>gb|AAT40986.1| RAN [Nicotiana sylvestris] gi|48249482|gb|AAT40987.1| RAN
           [Nicotiana sylvestris]
          Length = 221

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   YNFEKPFLYLARKLAGDANLHFVESPALAPPEVSIDMEAQQKHEQE 139
           YNFEKPFLYLARKLAGDANLHFVESPALAPPEV ID+ AQQ HEQE
Sbjct: 158 YNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQLHEQE 203


>gb|AAB97312.1| salt stress inducible small GTP binding protein Ran1 homolog
           [Arabidopsis thaliana] gi|3559764|gb|AAC34900.1| unknown
           [Arabidopsis thaliana]
          Length = 221

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   YNFEKPFLYLARKLAGDANLHFVESPALAPPEVSIDMEAQQKHEQE 139
           YNFEKPFLYLARKLAGDANLHFVESPALAPPEV ID+ AQQ+HE E
Sbjct: 158 YNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQQHEAE 203


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