BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039342
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003553316.1| PREDICTED: transcription-repair-coupling fac...   126   2e-27
emb|CBI21248.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   125   3e-27
ref|XP_003548486.1| PREDICTED: transcription-repair-coupling fac...   124   8e-27

>ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|222861200|gb|EEE98742.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -3

Query: 301 KLYVRRMAADLGITRIYASGKMVGMITNMSRKVFKLITESMTSDIHRNSLVFENNQIKAX 122
           KLYVRRMAAD+GITRIYASGKMVGM TNMS+KVFKL+T+SM+S++HRNSL F+ N+IKA 
Sbjct: 727 KLYVRRMAADIGITRIYASGKMVGMETNMSKKVFKLMTDSMSSEMHRNSLFFDGNEIKAE 786

Query: 121 XXXXXXXXXXLHWIFQCMAELHASLPALVKY 29
                     L+WIFQC+AELHA LPAL+KY
Sbjct: 787 LLLELPRAQLLNWIFQCIAELHACLPALIKY 817


>ref|XP_003553316.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 823

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/91 (68%), Positives = 74/91 (81%)
 Frame = -3

Query: 301  KLYVRRMAADLGITRIYASGKMVGMITNMSRKVFKLITESMTSDIHRNSLVFENNQIKAX 122
            KLY+RRMAADLGITRIY+SGKM+ M TNMS+KVFK++TESM SD+HRNSLV E +QIKA 
Sbjct: 733  KLYLRRMAADLGITRIYSSGKMIYMKTNMSKKVFKMMTESMASDLHRNSLVLEGDQIKAE 792

Query: 121  XXXXXXXXXXLHWIFQCMAELHASLPALVKY 29
                      L+WIFQC+AELHASLP+ +KY
Sbjct: 793  LLLELPKEQLLNWIFQCLAELHASLPSFIKY 823


>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/91 (71%), Positives = 73/91 (80%)
 Frame = -3

Query: 301 KLYVRRMAADLGITRIYASGKMVGMITNMSRKVFKLITESMTSDIHRNSLVFENNQIKAX 122
           KLYV+RMAADLGITRIYASGK V M T M++KVFKLIT+SM SDI RNSLVFE NQIKA 
Sbjct: 550 KLYVKRMAADLGITRIYASGKTVIMRTKMNKKVFKLITDSMASDIIRNSLVFEENQIKAE 609

Query: 121 XXXXXXXXXXLHWIFQCMAELHASLPALVKY 29
                     L+W+FQC+AELHASLPAL+KY
Sbjct: 610 LLLELPREQFLNWVFQCLAELHASLPALIKY 640


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis vinifera]
          Length = 823

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/91 (71%), Positives = 73/91 (80%)
 Frame = -3

Query: 301  KLYVRRMAADLGITRIYASGKMVGMITNMSRKVFKLITESMTSDIHRNSLVFENNQIKAX 122
            KLYV+RMAADLGITRIYASGK V M T M++KVFKLIT+SM SDI RNSLVFE NQIKA 
Sbjct: 733  KLYVKRMAADLGITRIYASGKTVIMRTKMNKKVFKLITDSMASDIIRNSLVFEENQIKAE 792

Query: 121  XXXXXXXXXXLHWIFQCMAELHASLPALVKY 29
                      L+W+FQC+AELHASLPAL+KY
Sbjct: 793  LLLELPREQFLNWVFQCLAELHASLPALIKY 823


>ref|XP_003548486.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 826

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/91 (67%), Positives = 73/91 (80%)
 Frame = -3

Query: 301  KLYVRRMAADLGITRIYASGKMVGMITNMSRKVFKLITESMTSDIHRNSLVFENNQIKAX 122
            KLY+RRMAADLGIT IY+SGKM+ M TNMS+KVFK++TESM SD+HRNSLV E +QIKA 
Sbjct: 736  KLYLRRMAADLGITSIYSSGKMIYMKTNMSKKVFKMMTESMASDLHRNSLVLEGDQIKAE 795

Query: 121  XXXXXXXXXXLHWIFQCMAELHASLPALVKY 29
                      L+WIFQC+AELHASLP+ +KY
Sbjct: 796  LLLELPKEQLLNWIFQCLAELHASLPSFIKY 826