BLASTX nr result
ID: Cimicifuga21_contig00039313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00039313
(392 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004563922.1| NADH-plastoquinone oxidoreductase subunit 1 ... 241 4e-62
ref|YP_002836145.1| NADH-plastoquinone oxidoreductase subunit 1 ... 238 3e-61
ref|YP_004769768.1| NADH-plastoquinone oxidoreductase subunit 1 ... 237 6e-61
ref|YP_001004234.1| NADH-plastoquinone oxidoreductase subunit 1 ... 237 6e-61
ref|YP_784442.1| NADH-plastoquinone oxidoreductase subunit 1 [Dr... 237 6e-61
>ref|YP_004563922.1| NADH-plastoquinone oxidoreductase subunit 1 [Nelumbo lutea]
gi|334362105|ref|YP_004564158.1| NADH-plastoquinone
oxidoreductase subunit 1 [Nelumbo nucifera]
gi|224474190|gb|ACN49379.1| NADH-plastoquinone
oxidoreductase subunit 1 [Nelumbo lutea]
gi|224474278|gb|ACN49464.1| NADH-plastoquinone
oxidoreductase subunit 1 [Nelumbo nucifera]
gi|290490060|gb|ADD31437.1| NADH-plastoquinone
oxidoreductase subunit 1 protein [Nelumbo nucifera]
gi|383286855|gb|AFH01505.1| NADH-plastoquinone
oxidoreductase subunit 1 (chloroplast) [Nelumbo
nucifera] gi|383286938|gb|AFH01587.1| NADH-plastoquinone
oxidoreductase subunit 1 (chloroplast) [Nelumbo lutea]
Length = 363
Score = 241 bits (615), Expect = 4e-62
Identities = 120/130 (92%), Positives = 122/130 (93%)
Frame = -1
Query: 392 RQPIGFTVFLISSLAECERLPFDLLEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 213
RQPIGF VFLISSLAECERLPFDL EAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Sbjct: 210 RQPIGFVVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 269
Query: 212 FVTVLYLGGWNLSIPYILIPQFFGINEVGGVFRTAISIFITLAKAYLFLFIPITTRWTLP 33
FVTVLYLGGWNLSIPYI IP+ FGIN+VGGVF T I IFITLAKAYLFLFIPI TRWTLP
Sbjct: 270 FVTVLYLGGWNLSIPYIFIPELFGINKVGGVFETTIGIFITLAKAYLFLFIPIATRWTLP 329
Query: 32 RMRMDQLLNL 3
RMRMDQLLNL
Sbjct: 330 RMRMDQLLNL 339
>ref|YP_002836145.1| NADH-plastoquinone oxidoreductase subunit 1 [Megaleranthis
saniculifolia] gi|226933937|gb|ACO92070.1|
NADH-plastoquinone oxidoreductase subunit 1
[Megaleranthis saniculifolia]
Length = 362
Score = 238 bits (608), Expect = 3e-61
Identities = 122/130 (93%), Positives = 123/130 (94%)
Frame = -1
Query: 392 RQPIGFTVFLISSLAECERLPFDLLEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 213
RQPIGF VFLISSLAECERLPFDL EAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Sbjct: 210 RQPIGFAVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 269
Query: 212 FVTVLYLGGWNLSIPYILIPQFFGINEVGGVFRTAISIFITLAKAYLFLFIPITTRWTLP 33
FVTVLYLGGWNLSIPYILIP+ FGI EVGGVF T I IFITLAKAYLFLFIPITTRWTLP
Sbjct: 270 FVTVLYLGGWNLSIPYILIPELFGI-EVGGVFGTTIGIFITLAKAYLFLFIPITTRWTLP 328
Query: 32 RMRMDQLLNL 3
RMRMDQLLNL
Sbjct: 329 RMRMDQLLNL 338
>ref|YP_004769768.1| NADH-plastoquinone oxidoreductase subunit 1 [Magnolia kwangsiensis]
gi|400256642|ref|YP_006576169.1| NdhA (chloroplast)
[Magnolia denudata] gi|452848741|ref|YP_007474423.1|
NADH dehydrogenase subunit 1 (chloroplast) [Magnolia
officinalis] gi|452848825|ref|YP_007474506.1| NADH
dehydrogenase subunit 1 (chloroplast) [Magnolia
officinalis subsp. biloba]
gi|452848909|ref|YP_007474590.1| NADH dehydrogenase
subunit 1 (chloroplast) [Magnolia grandiflora]
gi|302424234|gb|ADL39110.1| NADH-plastoquinone
oxidoreductase subunit 1 [Magnolia kwangsiensis]
gi|343887593|gb|AEM65272.1| NdhA [Magnolia denudata]
gi|372862221|gb|AEX98305.1| NADH dehydrogenase subunit 1
(chloroplast) [Magnolia liliiflora]
gi|372862305|gb|AEX98388.1| NADH dehydrogenase subunit 1
(chloroplast) [Magnolia denudata]
gi|372862474|gb|AEX98555.1| NADH dehydrogenase subunit 1
(chloroplast) [Magnolia officinalis]
gi|372862558|gb|AEX98638.1| NADH dehydrogenase subunit 1
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862643|gb|AEX98722.1| NADH dehydrogenase subunit 1
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862728|gb|AEX98806.1| NADH dehydrogenase subunit 1
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862896|gb|AEX98972.1| NADH dehydrogenase subunit 1
(chloroplast) [Magnolia grandiflora]
gi|372863067|gb|AEX99141.1| NADH dehydrogenase subunit 1
(chloroplast) [Magnolia grandiflora]
Length = 363
Score = 237 bits (605), Expect = 6e-61
Identities = 119/130 (91%), Positives = 121/130 (93%)
Frame = -1
Query: 392 RQPIGFTVFLISSLAECERLPFDLLEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 213
RQPIGF VFLISSLAECERLPFDL EAEEELVAGYQTEYSGIK GLFYVASYLNLLVSSL
Sbjct: 210 RQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKSGLFYVASYLNLLVSSL 269
Query: 212 FVTVLYLGGWNLSIPYILIPQFFGINEVGGVFRTAISIFITLAKAYLFLFIPITTRWTLP 33
FVTVLYLGGWNLSIPYI IP+ FGIN+ GGVF T I IFITLAKAYLFLFIPITTRWTLP
Sbjct: 270 FVTVLYLGGWNLSIPYIFIPELFGINKTGGVFGTTIGIFITLAKAYLFLFIPITTRWTLP 329
Query: 32 RMRMDQLLNL 3
RMRMDQLLNL
Sbjct: 330 RMRMDQLLNL 339
>ref|YP_001004234.1| NADH-plastoquinone oxidoreductase subunit 1 [Ranunculus macranthus]
gi|156632653|sp|A1XGT6.1|NU1C_RANMC RecName:
Full=NAD(P)H-quinone oxidoreductase subunit 1,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 1; Short=NDH subunit 1; AltName:
Full=NADH-plastoquinone oxidoreductase subunit 1
gi|85540852|gb|ABC70804.1| NADH-plastoquinone
oxidoreductase subunit 1 [Ranunculus macranthus]
Length = 363
Score = 237 bits (605), Expect = 6e-61
Identities = 119/130 (91%), Positives = 122/130 (93%)
Frame = -1
Query: 392 RQPIGFTVFLISSLAECERLPFDLLEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 213
RQPIGFTVF ISSLAECERLPFDL EAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Sbjct: 210 RQPIGFTVFFISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 269
Query: 212 FVTVLYLGGWNLSIPYILIPQFFGINEVGGVFRTAISIFITLAKAYLFLFIPITTRWTLP 33
FVTVLYLGGWNLSIP+ILIP+ FGINE+GGVF I IFITLAKAYLFLFI ITTRWTLP
Sbjct: 270 FVTVLYLGGWNLSIPHILIPELFGINEMGGVFGMTIGIFITLAKAYLFLFISITTRWTLP 329
Query: 32 RMRMDQLLNL 3
RMRMDQLLNL
Sbjct: 330 RMRMDQLLNL 339
>ref|YP_784442.1| NADH-plastoquinone oxidoreductase subunit 1 [Drimys granadensis]
gi|122164391|sp|Q06GU1.1|NU1C_DRIGR RecName:
Full=NAD(P)H-quinone oxidoreductase subunit 1,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 1; Short=NDH subunit 1; AltName:
Full=NADH-plastoquinone oxidoreductase subunit 1
gi|112032718|gb|ABH88353.1| NADH-plastoquinone
oxidoreductase subunit 1 [Drimys granadensis]
Length = 363
Score = 237 bits (605), Expect = 6e-61
Identities = 118/130 (90%), Positives = 121/130 (93%)
Frame = -1
Query: 392 RQPIGFTVFLISSLAECERLPFDLLEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 213
RQPIGF VF+ISSLAECERLPFDL EAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL
Sbjct: 210 RQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 269
Query: 212 FVTVLYLGGWNLSIPYILIPQFFGINEVGGVFRTAISIFITLAKAYLFLFIPITTRWTLP 33
FVTVLYLGGWNLSIPYI IP+ FGIN+ GGVF T I I ITLAKAYLFLFIPITTRWTLP
Sbjct: 270 FVTVLYLGGWNLSIPYIFIPELFGINKTGGVFGTTIGILITLAKAYLFLFIPITTRWTLP 329
Query: 32 RMRMDQLLNL 3
RMRMDQLLNL
Sbjct: 330 RMRMDQLLNL 339