BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039270
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...    99   3e-19
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...    96   3e-18
ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar...    92   3e-17

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/73 (69%), Positives = 58/73 (79%)
 Frame = -3

Query: 227 RRVFDRLLERKIPLWNAMIAGYAQNGFFEEALSLYIEMEVDAGLFPNPTTMASVLPACVH 48
           RRVFD +L R+I LWNAMI+GYA+NG  E+AL L+IEM   AGL PN TTMASV+PACVH
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412

Query: 47  CEKFPQKEGIHGY 9
           CE F  KE IHGY
Sbjct: 413 CEAFSNKESIHGY 425


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/74 (66%), Positives = 55/74 (74%)
 Frame = -3

Query: 227 RRVFDRLLERKIPLWNAMIAGYAQNGFFEEALSLYIEMEVDAGLFPNPTTMASVLPACVH 48
           RRVFD +LERK  LWNAMIAGYAQN   E+AL L+IEM   AGL PN TTMAS++PA   
Sbjct: 338 RRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASAR 397

Query: 47  CEKFPQKEGIHGYI 6
           CE F  KE IHGY+
Sbjct: 398 CESFFSKESIHGYV 411


>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/74 (63%), Positives = 58/74 (78%)
 Frame = -3

Query: 227 RRVFDRLLERKIPLWNAMIAGYAQNGFFEEALSLYIEMEVDAGLFPNPTTMASVLPACVH 48
           R VFD +L+RKI LWNAMIAGYAQ+   E+AL L+IEME  AGL+ N TTM+S++PA V 
Sbjct: 272 RLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVR 331

Query: 47  CEKFPQKEGIHGYI 6
           CE   +KEGIHGY+
Sbjct: 332 CEGISRKEGIHGYV 345


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
           ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/73 (63%), Positives = 54/73 (73%)
 Frame = -3

Query: 224 RVFDRLLERKIPLWNAMIAGYAQNGFFEEALSLYIEMEVDAGLFPNPTTMASVLPACVHC 45
           RVFD + +RKI LWNAMI GYAQN + EEAL L+IEME  AGL  N TTMA V+PACV  
Sbjct: 355 RVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRS 414

Query: 44  EKFPQKEGIHGYI 6
             F +KE IHG++
Sbjct: 415 GAFSKKEAIHGFV 427


>ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/74 (60%), Positives = 54/74 (72%)
 Frame = -3

Query: 227 RRVFDRLLERKIPLWNAMIAGYAQNGFFEEALSLYIEMEVDAGLFPNPTTMASVLPACVH 48
           RRVFD + +RKI LWNAMIAGY+QN   +EAL L+I ME  AGL  N TTMA V+PACV 
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 47  CEKFPQKEGIHGYI 6
              F +KE IHG++
Sbjct: 418 SGAFSRKEAIHGFV 431