BLASTX nr result

ID: Cimicifuga21_contig00039241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039241
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW67820.1| hypothetical protein ZEAMMB73_384674 [Zea mays]        193   1e-47
gb|ACN34672.1| unknown [Zea mays] gi|413933270|gb|AFW67821.1| dy...   193   1e-47
ref|NP_001147100.1| dynamin-related protein 1C [Zea mays] gi|195...   193   1e-47
ref|NP_001151519.1| dynamin-related protein 1C [Zea mays] gi|195...   191   4e-47
ref|XP_003560840.1| PREDICTED: dynamin-related protein 1C-like [...   191   5e-47

>gb|AFW67820.1| hypothetical protein ZEAMMB73_384674 [Zea mays]
          Length = 610

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/99 (91%), Positives = 96/99 (96%)
 Frame = +1

Query: 1   VGGDQGAQLYTILEMCRAFDRVFKEHLDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSY 180
           +GGD GAQLYTIL+MCRAFDRVFKEHLDGGRPGGDRIY VFDNQLPAALKKLPFDRHLS 
Sbjct: 326 IGGDAGAQLYTILDMCRAFDRVFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLSM 385

Query: 181 QNVRKVVSEADGYQPHLIAPEQGYRRLIDSSLSFFRGPA 297
           QNVRKV+SEADGYQPHLIAPEQGYRRLIDSSLS+F+GPA
Sbjct: 386 QNVRKVISEADGYQPHLIAPEQGYRRLIDSSLSYFKGPA 424


>gb|ACN34672.1| unknown [Zea mays] gi|413933270|gb|AFW67821.1| dynamin protein 1C
           [Zea mays]
          Length = 611

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/99 (91%), Positives = 96/99 (96%)
 Frame = +1

Query: 1   VGGDQGAQLYTILEMCRAFDRVFKEHLDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSY 180
           +GGD GAQLYTIL+MCRAFDRVFKEHLDGGRPGGDRIY VFDNQLPAALKKLPFDRHLS 
Sbjct: 326 IGGDAGAQLYTILDMCRAFDRVFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLSM 385

Query: 181 QNVRKVVSEADGYQPHLIAPEQGYRRLIDSSLSFFRGPA 297
           QNVRKV+SEADGYQPHLIAPEQGYRRLIDSSLS+F+GPA
Sbjct: 386 QNVRKVISEADGYQPHLIAPEQGYRRLIDSSLSYFKGPA 424


>ref|NP_001147100.1| dynamin-related protein 1C [Zea mays] gi|195607202|gb|ACG25431.1|
           dynamin-related protein 1C [Zea mays]
           gi|219884353|gb|ACL52551.1| unknown [Zea mays]
           gi|219888263|gb|ACL54506.1| unknown [Zea mays]
           gi|414872448|tpg|DAA51005.1| TPA: dynamin protein 1C
           isoform 1 [Zea mays] gi|414872449|tpg|DAA51006.1| TPA:
           dynamin protein 1C isoform 2 [Zea mays]
          Length = 611

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/99 (91%), Positives = 96/99 (96%)
 Frame = +1

Query: 1   VGGDQGAQLYTILEMCRAFDRVFKEHLDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSY 180
           +GGD GAQLYTIL+MCRAFDRVFKEHLDGGRPGGDRIY VFDNQLPAALKKLPFDRHLS 
Sbjct: 326 IGGDAGAQLYTILDMCRAFDRVFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLSM 385

Query: 181 QNVRKVVSEADGYQPHLIAPEQGYRRLIDSSLSFFRGPA 297
           QNVRKV+SEADGYQPHLIAPEQGYRRLIDSSLS+F+GPA
Sbjct: 386 QNVRKVISEADGYQPHLIAPEQGYRRLIDSSLSYFKGPA 424


>ref|NP_001151519.1| dynamin-related protein 1C [Zea mays] gi|195647378|gb|ACG43157.1|
           dynamin-related protein 1C [Zea mays]
          Length = 611

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/99 (90%), Positives = 95/99 (95%)
 Frame = +1

Query: 1   VGGDQGAQLYTILEMCRAFDRVFKEHLDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSY 180
           +GGD GAQLYTIL+MCRAFDRVFKEHLDGGRPGGDRIY VFDNQLP ALKKLPFDRHLS 
Sbjct: 326 IGGDAGAQLYTILDMCRAFDRVFKEHLDGGRPGGDRIYGVFDNQLPTALKKLPFDRHLSM 385

Query: 181 QNVRKVVSEADGYQPHLIAPEQGYRRLIDSSLSFFRGPA 297
           QNVRKV+SEADGYQPHLIAPEQGYRRLIDSSLS+F+GPA
Sbjct: 386 QNVRKVISEADGYQPHLIAPEQGYRRLIDSSLSYFKGPA 424


>ref|XP_003560840.1| PREDICTED: dynamin-related protein 1C-like [Brachypodium
           distachyon]
          Length = 612

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/99 (90%), Positives = 96/99 (96%)
 Frame = +1

Query: 1   VGGDQGAQLYTILEMCRAFDRVFKEHLDGGRPGGDRIYLVFDNQLPAALKKLPFDRHLSY 180
           +GGD GAQLYTIL+MCRAFDRVFKEHLDGGRPGGDRIY VFD+QLPAALKKLPFD+HLS 
Sbjct: 327 IGGDAGAQLYTILDMCRAFDRVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDKHLSL 386

Query: 181 QNVRKVVSEADGYQPHLIAPEQGYRRLIDSSLSFFRGPA 297
           QNVRKV+SEADGYQPHLIAPEQGYRRLIDSSLS+FRGPA
Sbjct: 387 QNVRKVISEADGYQPHLIAPEQGYRRLIDSSLSYFRGPA 425


Top