BLASTX nr result

ID: Cimicifuga21_contig00039208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039208
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC79516.1| hypothetical protein OsI_20595 [Oryza sativa Indi...    64   2e-08
ref|NP_001056019.1| Os05g0512000 [Oryza sativa Japonica Group] g...    64   2e-08
gb|AAV59289.1| putative BRCT domain-containing protein [Oryza sa...    64   2e-08
gb|AAT44144.1| unknown protein [Oryza sativa Japonica Group]           64   2e-08
ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    62   4e-08

>gb|EEC79516.1| hypothetical protein OsI_20595 [Oryza sativa Indica Group]
          Length = 987

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
 Frame = -2

Query: 294 FDSEMFEWTQRPCSPELCSTPSKNKVVHQNESDRVQENNELGSQYFTSPGD--GPVS--- 130
           FDSE+FEWTQRPCSPEL STP K +   +++ D+++E  +    +     D  G  S   
Sbjct: 265 FDSEIFEWTQRPCSPELYSTPLKKQSKAKSKLDQIEEKGDEEDVHIGGSFDKLGNASNAA 324

Query: 129 -----ENTKQRNGSTDTESLSYLKVNNSKAPTTGRAKSNTSGKSKRK 4
                + TKQ+   T   + +  K++N   P   ++ +N  G ++RK
Sbjct: 325 QLVNTKATKQKRKKTSPSNKNSAKLSNRAEPCIKKSDANQQGSNRRK 371


>ref|NP_001056019.1| Os05g0512000 [Oryza sativa Japonica Group]
           gi|113579570|dbj|BAF17933.1| Os05g0512000 [Oryza sativa
           Japonica Group] gi|222632199|gb|EEE64331.1| hypothetical
           protein OsJ_19171 [Oryza sativa Japonica Group]
          Length = 987

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
 Frame = -2

Query: 294 FDSEMFEWTQRPCSPELCSTPSKNKVVHQNESDRVQENNELGSQYFTSPGD--GPVS--- 130
           FDSE+FEWTQRPCSPEL STP K +   +++ D+++E  +    +     D  G  S   
Sbjct: 265 FDSEIFEWTQRPCSPELYSTPLKKQSKAKSKLDQIEEKGDEEDVHIGGSFDKLGNASNAA 324

Query: 129 -----ENTKQRNGSTDTESLSYLKVNNSKAPTTGRAKSNTSGKSKRK 4
                + TKQ+   T   + +  K++N   P   ++ +N  G ++RK
Sbjct: 325 QLVNTKATKQKRKKTSPSNKNSAKLSNRAEPCIKKSDANQQGSNRRK 371


>gb|AAV59289.1| putative BRCT domain-containing protein [Oryza sativa Japonica
           Group]
          Length = 799

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
 Frame = -2

Query: 294 FDSEMFEWTQRPCSPELCSTPSKNKVVHQNESDRVQENNELGSQYFTSPGD--GPVS--- 130
           FDSE+FEWTQRPCSPEL STP K +   +++ D+++E  +    +     D  G  S   
Sbjct: 77  FDSEIFEWTQRPCSPELYSTPLKKQSKAKSKLDQIEEKGDEEDVHIGGSFDKLGNASNAA 136

Query: 129 -----ENTKQRNGSTDTESLSYLKVNNSKAPTTGRAKSNTSGKSKRK 4
                + TKQ+   T   + +  K++N   P   ++ +N  G ++RK
Sbjct: 137 QLVNTKATKQKRKKTSPSNKNSAKLSNRAEPCIKKSDANQQGSNRRK 183


>gb|AAT44144.1| unknown protein [Oryza sativa Japonica Group]
          Length = 995

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
 Frame = -2

Query: 294 FDSEMFEWTQRPCSPELCSTPSKNKVVHQNESDRVQENNELGSQYFTSPGD--GPVS--- 130
           FDSE+FEWTQRPCSPEL STP K +   +++ D+++E  +    +     D  G  S   
Sbjct: 267 FDSEIFEWTQRPCSPELYSTPLKKQSKAKSKLDQIEEKGDEEDVHIGGSFDKLGNASNAA 326

Query: 129 -----ENTKQRNGSTDTESLSYLKVNNSKAPTTGRAKSNTSGKSKRK 4
                + TKQ+   T   + +  K++N   P   ++ +N  G ++RK
Sbjct: 327 QLVNTKATKQKRKKTSPSNKNSAKLSNRAEPCIKKSDANQQGSNRRK 373


>ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
           vinifera]
          Length = 1044

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
 Frame = -2

Query: 294 FDSEMFEWTQRPCSPELCSTPSKNKVVHQNESDRVQE-NNELGSQYFTSPGDGPVSENTK 118
           FDSE+FEWTQR CSPELCS+P + +V   +E D +Q+  N+  SQ  T   + P +EN  
Sbjct: 274 FDSEIFEWTQRACSPELCSSPMEMQVPDSDEFDEIQKGENKPDSQSATKEEEAPRTENMT 333

Query: 117 QRNGSTDTESLSYLKVNNSKAPTTGRA--------------KSNTSGKSKR 7
             N    T   + +++    +P T  A              KSN  G+ KR
Sbjct: 334 GMNCKEGT-GCAAMRLPAMSSPETKNANGQNGIGISKKRGRKSNKKGQKKR 383


Top