BLASTX nr result

ID: Cimicifuga21_contig00039207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039207
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70147.1| hypothetical protein VITISV_006221 [Vitis vinifera]   125   4e-27
emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]   122   3e-26
emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]   121   5e-26
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      118   6e-25
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      118   6e-25

>emb|CAN70147.1| hypothetical protein VITISV_006221 [Vitis vinifera]
          Length = 304

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/74 (75%), Positives = 63/74 (85%)
 Frame = +3

Query: 12  CKKQNSVSLSTTEPEYIAAGSACTQLLWMRQMLLDYGLSQGCMTLLCDNMSTIQISKNPV 191
           CKKQNS+SLST E EYIAAGS C+QLLW++QML DYG+ QG M + CDN S I ISKNPV
Sbjct: 191 CKKQNSISLSTAEAEYIAAGSCCSQLLWIKQMLRDYGIDQGTMVVFCDNTSAINISKNPV 250

Query: 192 IHSRTKHIDIRHHF 233
           +HSRTKHIDIRHHF
Sbjct: 251 LHSRTKHIDIRHHF 264


>emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]
          Length = 324

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/73 (76%), Positives = 62/73 (84%)
 Frame = +3

Query: 15  KKQNSVSLSTTEPEYIAAGSACTQLLWMRQMLLDYGLSQGCMTLLCDNMSTIQISKNPVI 194
           KKQNSVSLST E EYIAAGS C+QLLW++QML DYG+ QG M + CDN S I ISKNPV+
Sbjct: 205 KKQNSVSLSTAEAEYIAAGSCCSQLLWIKQMLRDYGIDQGTMVVFCDNTSAINISKNPVL 264

Query: 195 HSRTKHIDIRHHF 233
           HSRTKHIDIRHHF
Sbjct: 265 HSRTKHIDIRHHF 277


>emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]
          Length = 956

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/73 (75%), Positives = 62/73 (84%)
 Frame = +3

Query: 15   KKQNSVSLSTTEPEYIAAGSACTQLLWMRQMLLDYGLSQGCMTLLCDNMSTIQISKNPVI 194
            KKQNSVSLST E EYIAAGS C+QLLW++QML +YG+ QG M + CDN S I ISKNPV+
Sbjct: 837  KKQNSVSLSTAEAEYIAAGSCCSQLLWIKQMLRBYGIDQGTMVVFCDNTSAINISKNPVL 896

Query: 195  HSRTKHIDIRHHF 233
            HSRTKHIDIRHHF
Sbjct: 897  HSRTKHIDIRHHF 909


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/75 (73%), Positives = 62/75 (82%)
 Frame = +3

Query: 9    FCKKQNSVSLSTTEPEYIAAGSACTQLLWMRQMLLDYGLSQGCMTLLCDNMSTIQISKNP 188
            F KKQN VSLST E EYIAAGS+C+QL+WM+QML +Y + Q  MTL CDNMS I ISKNP
Sbjct: 1454 FSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNP 1513

Query: 189  VIHSRTKHIDIRHHF 233
            V HSRTKHIDIRHH+
Sbjct: 1514 VQHSRTKHIDIRHHY 1528


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/75 (73%), Positives = 62/75 (82%)
 Frame = +3

Query: 9    FCKKQNSVSLSTTEPEYIAAGSACTQLLWMRQMLLDYGLSQGCMTLLCDNMSTIQISKNP 188
            F KKQN VSLST E EYIAAGS+C+QL+WM+QML +Y + Q  MTL CDNMS I ISKNP
Sbjct: 1451 FSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNP 1510

Query: 189  VIHSRTKHIDIRHHF 233
            V HSRTKHIDIRHH+
Sbjct: 1511 VQHSRTKHIDIRHHY 1525


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