BLASTX nr result

ID: Cimicifuga21_contig00039191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039191
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    65   8e-09
gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japo...    65   8e-09
gb|EEE50807.1| hypothetical protein OsJ_31193 [Oryza sativa Japo...    65   8e-09
gb|AAP53215.2| retrotransposon protein, putative, unclassified, ...    65   8e-09
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    64   1e-08

>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = -2

Query: 225  KILYLRGWDKICQPKSLGGLGIREFHKSNQASLSRIVWRLLTKPFDLWSQVLKSKYFTKT 46
            K + LR W  IC+P S GGLGIR+    N++ L +  WR+LT P DL S VLKSKYF  T
Sbjct: 1350 KGMALRSWKDICKPVSEGGLGIRDLMAVNKSILVQSAWRILTNPNDLLSSVLKSKYFPNT 1409


>gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japonica Group]
          Length = 881

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = -2

Query: 225 KILYLRGWDKICQPKSLGGLGIREFHKSNQASLSRIVWRLLTKPFDLWSQVLKSKYFTKT 46
           K + LR W  IC+P S GGLGIR+    N++ L +  WR+LT P DL S VLKSKYF  T
Sbjct: 446 KGMALRSWKDICKPVSEGGLGIRDLMAVNKSILVQSAWRILTNPNDLLSSVLKSKYFPNT 505


>gb|EEE50807.1| hypothetical protein OsJ_31193 [Oryza sativa Japonica Group]
          Length = 458

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = -2

Query: 225 KILYLRGWDKICQPKSLGGLGIREFHKSNQASLSRIVWRLLTKPFDLWSQVLKSKYFTKT 46
           K + LR W  IC+P S GGLGIR+    N++ L +  WR+LT P DL S VLKSKYF  T
Sbjct: 23  KGMALRSWKDICKPVSEGGLGIRDLMAVNKSILVQSAWRILTNPNDLLSSVLKSKYFPNT 82


>gb|AAP53215.2| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1701

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = -2

Query: 225  KILYLRGWDKICQPKSLGGLGIREFHKSNQASLSRIVWRLLTKPFDLWSQVLKSKYFTKT 46
            K + LR W  IC+P S GGLGIR+    N++ L +  WR+LT P DL S VLKSKYF  T
Sbjct: 1342 KGMALRSWKDICKPVSEGGLGIRDLMAVNKSILVQSAWRILTNPNDLLSSVLKSKYFPNT 1401


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 46/74 (62%)
 Frame = -2

Query: 225 KILYLRGWDKICQPKSLGGLGIREFHKSNQASLSRIVWRLLTKPFDLWSQVLKSKYFTKT 46
           K L+L  WD++C PKS GGLGIR     N+A +S++ WRL+   + LW+++L+SKY    
Sbjct: 511 KKLHLVAWDRVCLPKSEGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARILRSKYRVGL 570

Query: 45  KATQPTRLTTGSSW 4
           +      ++ GS W
Sbjct: 571 REV----VSRGSRW 580


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