BLASTX nr result

ID: Cimicifuga21_contig00039189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039189
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]      67   1e-09
gb|ABF99150.1| transposon protein, putative, unclassified, expre...    60   2e-07
ref|NP_001051442.2| Os03g0777700 [Oryza sativa Japonica Group] g...    60   2e-07
gb|AAM19033.1|AC084748_23 putative transposase [Oryza sativa Jap...    60   2e-07
gb|EAZ01211.1| hypothetical protein OsI_23236 [Oryza sativa Indi...    59   4e-07

>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/81 (44%), Positives = 47/81 (58%)
 Frame = +3

Query: 3   QIVYKKDLDFVSCSCNKFESSAIPCRHILGYLHKFHDFKELPSEYILKRWTKLAKSDTIV 182
           ++VY    +   CSC  FES  IPCRHIL ++ K   F E+PS YI+ RWTKLA S  I 
Sbjct: 606 EVVYCLSNNIAHCSCKMFESEGIPCRHIL-FILKGKGFSEIPSHYIVNRWTKLATSKPIF 664

Query: 183 AGDGMEIVDGKSYFLERSRLI 245
             DG  +++  S F   S L+
Sbjct: 665 DCDG-NVLEACSKFESESTLV 684


>gb|ABF99150.1| transposon protein, putative, unclassified, expressed [Oryza sativa
           Japonica Group]
          Length = 798

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = +3

Query: 33  VSCSCNKFESSAIPCRHILGYLHKFHDFKELPSEYILKRWTKLAKSDTIVAGDGMEIVDG 212
           V CSC KFE + IPC H+L  L +  + KELP  YILKRW K A+S++     G E VD 
Sbjct: 502 VVCSCKKFEFTGIPCCHVLKVL-EVRNIKELPPHYILKRWRKDAQSESPRENYGFEAVDE 560

Query: 213 KSYFLERSR 239
              FL   R
Sbjct: 561 DPRFLLSKR 569


>ref|NP_001051442.2| Os03g0777700 [Oryza sativa Japonica Group]
           gi|108711354|gb|ABF99149.1| transposon protein,
           putative, unclassified, expressed [Oryza sativa Japonica
           Group] gi|215767795|dbj|BAH00024.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255674942|dbj|BAF13356.2| Os03g0777700 [Oryza sativa
           Japonica Group]
          Length = 800

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = +3

Query: 33  VSCSCNKFESSAIPCRHILGYLHKFHDFKELPSEYILKRWTKLAKSDTIVAGDGMEIVDG 212
           V CSC KFE + IPC H+L  L +  + KELP  YILKRW K A+S++     G E VD 
Sbjct: 502 VVCSCKKFEFTGIPCCHVLKVL-EVRNIKELPPHYILKRWRKDAQSESPRENYGFEAVDE 560

Query: 213 KSYFLERSR 239
              FL   R
Sbjct: 561 DPRFLLSKR 569


>gb|AAM19033.1|AC084748_23 putative transposase [Oryza sativa Japonica Group]
            gi|222625896|gb|EEE60028.1| hypothetical protein
            OsJ_12791 [Oryza sativa Japonica Group]
          Length = 1203

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = +3

Query: 33   VSCSCNKFESSAIPCRHILGYLHKFHDFKELPSEYILKRWTKLAKSDTIVAGDGMEIVDG 212
            V CSC KFE + IPC H+L  L +  + KELP  YILKRW K A+S++     G E VD 
Sbjct: 905  VVCSCKKFEFTGIPCCHVLKVL-EVRNIKELPPHYILKRWRKDAQSESPRENYGFEAVDE 963

Query: 213  KSYFLERSR 239
               FL   R
Sbjct: 964  DPRFLLSKR 972


>gb|EAZ01211.1| hypothetical protein OsI_23236 [Oryza sativa Indica Group]
          Length = 335

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/45 (66%), Positives = 32/45 (71%)
 Frame = +3

Query: 33  VSCSCNKFESSAIPCRHILGYLHKFHDFKELPSEYILKRWTKLAK 167
           VSCSC KFE   I CRH L  L   ++ KELPSEYILKRWTK AK
Sbjct: 288 VSCSCKKFEFVGILCRHALKVLDH-NNIKELPSEYILKRWTKYAK 331


Top