BLASTX nr result

ID: Cimicifuga21_contig00039178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039178
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV43357.1| auxin-response factor [Citrus sinensis]                112   2e-23
gb|ADL36575.1| ARF domain class transcription factor [Malus x do...   110   2e-22
ref|XP_002512658.1| transcription factor, putative [Ricinus comm...   109   3e-22
ref|XP_002299455.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vi...   108   4e-22

>gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/72 (73%), Positives = 58/72 (80%)
 Frame = +2

Query: 2   LYAALWQACAGPLVTVPHLGEKVYYFPQGHLEQVEAYTKQETNVQMPKYDLPSKILCSVV 181
           LY  LW ACAGPLVTVP  GE+VYYFPQGH+EQVEA T Q  + QMP YDLPSKILC V+
Sbjct: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104

Query: 182 HVQLMAELDTDE 217
           +VQL AE DTDE
Sbjct: 105 NVQLKAEPDTDE 116


>gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
          Length = 695

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/72 (68%), Positives = 60/72 (83%)
 Frame = +2

Query: 2   LYAALWQACAGPLVTVPHLGEKVYYFPQGHLEQVEAYTKQETNVQMPKYDLPSKILCSVV 181
           LY  LW+ CAGPLV VP  GEKVYYFPQGH+EQ+E+ T QE N Q+P ++LPSKILCSVV
Sbjct: 22  LYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLFNLPSKILCSVV 81

Query: 182 HVQLMAELDTDE 217
           H++L+AE +TDE
Sbjct: 82  HIRLLAEQETDE 93


>ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
           gi|223548619|gb|EEF50110.1| transcription factor,
           putative [Ricinus communis]
          Length = 787

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/72 (72%), Positives = 56/72 (77%)
 Frame = +2

Query: 2   LYAALWQACAGPLVTVPHLGEKVYYFPQGHLEQVEAYTKQETNVQMPKYDLPSKILCSVV 181
           LY  LW ACAGPLVTVP  GE V+YFPQGH+EQVEA T Q  + QMP YDLP KILC VV
Sbjct: 19  LYKELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQAADEQMPAYDLPGKILCRVV 78

Query: 182 HVQLMAELDTDE 217
           +VQL AE DTDE
Sbjct: 79  NVQLKAEPDTDE 90


>ref|XP_002299455.1| predicted protein [Populus trichocarpa] gi|222846713|gb|EEE84260.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/72 (66%), Positives = 59/72 (81%)
 Frame = +2

Query: 2   LYAALWQACAGPLVTVPHLGEKVYYFPQGHLEQVEAYTKQETNVQMPKYDLPSKILCSVV 181
           LY  LW+ACAGPLV VP  GE+V+YFPQGH+EQ+EA T QE N ++P ++LPSKILC V+
Sbjct: 3   LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRVI 62

Query: 182 HVQLMAELDTDE 217
           H QL+AE DTDE
Sbjct: 63  HTQLLAEQDTDE 74


>ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
           gi|297734502|emb|CBI15749.3| unnamed protein product
           [Vitis vinifera]
          Length = 862

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/72 (70%), Positives = 58/72 (80%)
 Frame = +2

Query: 2   LYAALWQACAGPLVTVPHLGEKVYYFPQGHLEQVEAYTKQETNVQMPKYDLPSKILCSVV 181
           LY  LW ACAGPLVTVP   E+V+YFPQGH+EQVEA T Q ++ QMP YDLPSKILC V+
Sbjct: 57  LYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLPSKILCRVI 116

Query: 182 HVQLMAELDTDE 217
           +VQL AE DTDE
Sbjct: 117 NVQLKAEPDTDE 128


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