BLASTX nr result

ID: Cimicifuga21_contig00039174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039174
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   124   1e-26
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              124   1e-26
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   122   2e-26
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002516947.1| conserved hypothetical protein [Ricinus comm...    89   3e-16

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/93 (62%), Positives = 73/93 (78%)
 Frame = +2

Query: 2    EVLSDIIVMLGNKLPCNLRNYNGAWAIQMCRSSTLENPKAAKSLVALAIYLSSPPNDLLA 181
            E+L DI++M+GNKLPC  RN++GAWA+++C +S + N K AK+LV LAI LSSPP+DL+ 
Sbjct: 1016 EILCDIVMMIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAKNLVDLAICLSSPPDDLIV 1075

Query: 182  AQNMASELLKVMSSEEGKAVEVSETYPIINHST 280
            AQ MA ELLKVM SE    +E SETY IINHST
Sbjct: 1076 AQEMAKELLKVMGSESSNPLETSETYAIINHST 1108


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/93 (62%), Positives = 73/93 (78%)
 Frame = +2

Query: 2    EVLSDIIVMLGNKLPCNLRNYNGAWAIQMCRSSTLENPKAAKSLVALAIYLSSPPNDLLA 181
            E+L DI++M+GNKLPC  RN++GAWA+++C +S + N K AK+LV LAI LSSPP+DL+ 
Sbjct: 984  EILCDIVMMIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAKNLVDLAICLSSPPDDLIV 1043

Query: 182  AQNMASELLKVMSSEEGKAVEVSETYPIINHST 280
            AQ MA ELLKVM SE    +E SETY IINHST
Sbjct: 1044 AQEMAKELLKVMGSESSNPLETSETYAIINHST 1076


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/93 (61%), Positives = 73/93 (78%)
 Frame = +2

Query: 2    EVLSDIIVMLGNKLPCNLRNYNGAWAIQMCRSSTLENPKAAKSLVALAIYLSSPPNDLLA 181
            ++L DI++M+GNKLPC  RN++GAWA+++C +S + N K AK+LV LAI LSSPP+DL+ 
Sbjct: 1037 QILCDIVMMIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAKNLVDLAICLSSPPDDLIV 1096

Query: 182  AQNMASELLKVMSSEEGKAVEVSETYPIINHST 280
            AQ MA ELLKVM SE    +E SETY IINHST
Sbjct: 1097 AQEMAKELLKVMGSESSNPLETSETYAIINHST 1129


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/93 (55%), Positives = 73/93 (78%)
 Frame = +2

Query: 2    EVLSDIIVMLGNKLPCNLRNYNGAWAIQMCRSSTLENPKAAKSLVALAIYLSSPPNDLLA 181
            E++SD+++++G KLP   RN +GAW+I +C+S+ ++N KAA+S+VALAI LSSPP+DL+ 
Sbjct: 1029 EIISDMLLVIGEKLPRKQRNSHGAWSIHVCKSNVIKNSKAARSVVALAISLSSPPSDLIV 1088

Query: 182  AQNMASELLKVMSSEEGKAVEVSETYPIINHST 280
            AQ+MA ELLKV  SE   A EVS ++ IIN ST
Sbjct: 1089 AQDMAKELLKVTGSETSNAEEVSGSHSIINQST 1121


>ref|XP_002516947.1| conserved hypothetical protein [Ricinus communis]
            gi|223544035|gb|EEF45561.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1357

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/96 (48%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
 Frame = +2

Query: 2    EVLSDIIVMLGNKLPCNLRNYNGAWAIQMCRSSTLENPKAAKSLVALAIYLSSPPNDLLA 181
            E+L DI++M+G+KLP   RN +G+W I +C+S  + N K A+S+ ALAI LSS P+DL+ 
Sbjct: 978  EILCDIMLMVGDKLPSKWRNSSGSWGINVCKSHGIRNSKVARSVAALAISLSS-PDDLIV 1036

Query: 182  AQNMASELLKV---MSSEEGKAVEVSETYPIINHST 280
            A +M+ ELL V   +  E  K +E+SE+ PIIN ST
Sbjct: 1037 AHDMSKELLDVTGFIGPESNKPLEISESCPIINQST 1072


Top