BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039158
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-23
ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...    63   6e-21
ref|XP_003590297.1| Pentatricopeptide repeat-containing protein ...    61   1e-18
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-18
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-18

>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score = 68.9 bits (167), Expect(2) = 4e-23
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   IIQAYCNQFNFRKVYVLLDEMEAQGCIPNVVTYTTLMYSLANL 131
           IIQ+YC Q NFRKVY LLD+M+AQGC PNVVTYTT+M SL  +
Sbjct: 256 IIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKV 298



 Score = 63.9 bits (154), Expect(2) = 4e-23
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +2

Query: 131 DEFEEALQVYEKMKSVKCKPDTLFYNALIHVLGRAG 238
           ++FEEALQ+ E+M+SV CKPDTLFYNALIH LGRAG
Sbjct: 299 EQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAG 334


>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score = 63.2 bits (152), Expect(2) = 6e-21
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +2

Query: 128 SDEFEEALQVYEKMKSVKCKPDTLFYNALIHVLGRAG 238
           S+E+EEALQ+ ++MKSV CKPDTLFYN+LIH LG+AG
Sbjct: 271 SEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAG 307



 Score = 62.4 bits (150), Expect(2) = 6e-21
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +3

Query: 3   IIQAYCNQFNFRKVYVLLDEMEAQGCIPNVVTYTTLMYSLA 125
           I+Q YC++ NF KVY LLDEMEAQG IPNVVTYT++M +LA
Sbjct: 229 IVQFYCHRSNFSKVYELLDEMEAQGLIPNVVTYTSVMSALA 269


>ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479345|gb|AES60548.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 661

 Score = 61.2 bits (147), Expect(2) = 1e-18
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +3

Query: 3   IIQAYCNQFNFRKVYVLLDEMEAQGCIPNVVTYTTLMYSLA 125
           IIQ YC + NF +VY LLDEM+AQ C PNVVTYTT+M +LA
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALA 304



 Score = 56.6 bits (135), Expect(2) = 1e-18
 Identities = 24/37 (64%), Positives = 33/37 (89%)
 Frame = +2

Query: 128 SDEFEEALQVYEKMKSVKCKPDTLFYNALIHVLGRAG 238
           +++FEEALQV E+M +V C+PDTLF+N+LI+ LGRAG
Sbjct: 306 AEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAG 342


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score = 58.9 bits (141), Expect(2) = 2e-18
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 128 SDEFEEALQVYEKMKSVKCKPDTLFYNALIHVLGRAG 238
           S+EFEEALQ+ E+MKS   +PDTLFYN LIH LGRAG
Sbjct: 324 SEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAG 360



 Score = 58.5 bits (140), Expect(2) = 2e-18
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = +3

Query: 3   IIQAYCNQFNFRKVYVLLDEMEAQGCIPNVVTYTTLMYSL 122
           II  YC++ NF KVY LLDEM+AQGC  NV+TYTT+M SL
Sbjct: 282 IILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSL 321


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score = 58.9 bits (141), Expect(2) = 2e-18
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 128 SDEFEEALQVYEKMKSVKCKPDTLFYNALIHVLGRAG 238
           S+EFEEALQ+ E+MKS   +PDTLFYN LIH LGRAG
Sbjct: 293 SEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAG 329



 Score = 58.5 bits (140), Expect(2) = 2e-18
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = +3

Query: 3   IIQAYCNQFNFRKVYVLLDEMEAQGCIPNVVTYTTLMYSL 122
           II  YC++ NF KVY LLDEM+AQGC  NV+TYTT+M SL
Sbjct: 251 IILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSL 290