BLASTX nr result

ID: Cimicifuga21_contig00039151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039151
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241...    86   2e-15
emb|CBI18109.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...    77   1e-12
ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
emb|CAN83105.1| hypothetical protein VITISV_007645 [Vitis vinifera]    67   1e-09

>ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera]
          Length = 1126

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/101 (51%), Positives = 60/101 (59%)
 Frame = -2

Query: 304 ELLPDLLSSEVHKSTGMLPPVKFQTAGGRSISVSNDAFQRAMSLLGDSEFGDLPNKGGAD 125
           E +P L  SE++      PP+KF TAGGRSISVS+DA QRA SLLGD E G   N+G  D
Sbjct: 209 EAVPHLKQSEMYNPAPNPPPIKFHTAGGRSISVSSDALQRARSLLGDPELGTSLNEGDED 268

Query: 124 GPPFPFLQENSSSGTSLNKENDLLPSCLQHESAKRKSTSKS 2
                FL + S    S +KEND   S   HE AK K TSKS
Sbjct: 269 DMISSFL-KGSFRDASSDKENDSDTSLSHHEKAKSKHTSKS 308


>emb|CBI18109.3| unnamed protein product [Vitis vinifera]
          Length = 1134

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/101 (51%), Positives = 60/101 (59%)
 Frame = -2

Query: 304 ELLPDLLSSEVHKSTGMLPPVKFQTAGGRSISVSNDAFQRAMSLLGDSEFGDLPNKGGAD 125
           E +P L  SE++      PP+KF TAGGRSISVS+DA QRA SLLGD E G   N+G  D
Sbjct: 232 EAVPHLKQSEMYNPAPNPPPIKFHTAGGRSISVSSDALQRARSLLGDPELGTSLNEGDED 291

Query: 124 GPPFPFLQENSSSGTSLNKENDLLPSCLQHESAKRKSTSKS 2
                FL + S    S +KEND   S   HE AK K TSKS
Sbjct: 292 DMISSFL-KGSFRDASSDKENDSDTSLSHHEKAKSKHTSKS 331


>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis] gi|223533978|gb|EEF35700.1| breast
           cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis]
          Length = 1156

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/97 (45%), Positives = 54/97 (55%)
 Frame = -2

Query: 295 PDLLSSEVHKSTGMLPPVKFQTAGGRSISVSNDAFQRAMSLLGDSEFGDLPNKGGADGPP 116
           P+LL SEVH S    P +KF TAGGRS+SVS+DA +RA SLLGD + G+  N+     P 
Sbjct: 213 PNLLQSEVHNSITKPPSIKFHTAGGRSLSVSSDALKRAKSLLGDPDLGNFLNEEDVVDPA 272

Query: 115 FPFLQENSSSGTSLNKENDLLPSCLQHESAKRKSTSK 5
                EN  + TS  KE D   +      AK K  SK
Sbjct: 273 LSVFNENRLNDTSSTKETDFRSTFTYPGIAKSKYISK 309


>ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|222861368|gb|EEE98910.1|
           predicted protein [Populus trichocarpa]
          Length = 1186

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/102 (40%), Positives = 56/102 (54%)
 Frame = -2

Query: 307 RELLPDLLSSEVHKSTGMLPPVKFQTAGGRSISVSNDAFQRAMSLLGDSEFGDLPNKGGA 128
           +E+  +LL  E+ K     PP+KF TAGGRS+SVS++A +RA SLLGD + G   N+G A
Sbjct: 267 KEVNTNLLEPEIQKP----PPIKFHTAGGRSLSVSSEALKRARSLLGDPDLGTFLNEGDA 322

Query: 127 DGPPFPFLQENSSSGTSLNKENDLLPSCLQHESAKRKSTSKS 2
                   + +     S NKEN +  S   H  A  K  SK+
Sbjct: 323 VDQGLSVFEGSGFGDASSNKEN-VFYSAFTHPRASSKHISKT 363


>emb|CAN83105.1| hypothetical protein VITISV_007645 [Vitis vinifera]
          Length = 288

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/68 (52%), Positives = 43/68 (63%)
 Frame = -2

Query: 304 ELLPDLLSSEVHKSTGMLPPVKFQTAGGRSISVSNDAFQRAMSLLGDSEFGDLPNKGGAD 125
           E +P L  SE++      PP+KF TAGGRSISVS+DA QRA SLLGD E G   N+G  D
Sbjct: 209 EAVPHLKQSEMYNPAPNPPPIKFHTAGGRSISVSSDALQRARSLLGDPELGTSLNEGDED 268

Query: 124 GPPFPFLQ 101
                FL+
Sbjct: 269 DMISSFLK 276


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