BLASTX nr result

ID: Cimicifuga21_contig00039140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039140
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine...    77   2e-12
emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]    71   1e-10
ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine...    70   2e-10
ref|XP_002528852.1| serine-threonine protein kinase, plant-type,...    68   7e-10
ref|XP_003616614.1| Receptor kinase-like protein [Medicago trunc...    67   2e-09

>ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1100

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/116 (41%), Positives = 68/116 (58%)
 Frame = +1

Query: 1    GNRNLCGGIAALELPNCDKHSGGSKVKMQRDERITFSVIMELIVGVAALGIVSGLVLKFS 180
            GN  LCGG+  LELPNC   + GS+    R  ++   +I+ L  G AA+ I+  L +   
Sbjct: 714  GNPGLCGGLPVLELPNCP--ATGSRSSSSRTRKM---LIVGLTAGAAAMCILIVLFMFLI 768

Query: 181  RKKNTSKIQANADNDDVDSFEGEHLLYTYHDLRIATGNFHAENVIGVGNFGRVYKG 348
             K+   K + +    DV SFEG   LY+Y+ L+ AT NF +EN+IG G+FG VY+G
Sbjct: 769  MKR---KKKHDPTVTDVISFEGPPRLYSYYVLKSATNNFSSENLIGEGSFGCVYRG 821


>emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]
          Length = 1009

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/116 (35%), Positives = 61/116 (52%)
 Frame = +1

Query: 1   GNRNLCGGIAALELPNCDKHSGGSKVKMQRDERITFSVIMELIVGVAALGIVSGLVLKFS 180
           GN NLCGG+  L LP C   S G K K     R    +++ +I+G+ +L +++  V+   
Sbjct: 615 GNYNLCGGVPKLHLPICVTSSTGEKRK-----RPAAKLLVPVIIGITSLSLLAFFVIILL 669

Query: 181 RKKNTSKIQANADNDDVDSFEGEHLLYTYHDLRIATGNFHAENVIGVGNFGRVYKG 348
           R+K +       D     SF  + L  ++ DL  AT  F   N+IGVG++G VYKG
Sbjct: 670 RRKKSRN-----DVSXTQSFNNQFLRISFADLHKATEGFXESNMIGVGSYGSVYKG 720


>ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570 [Vitis vinifera]
          Length = 1009

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/116 (35%), Positives = 61/116 (52%)
 Frame = +1

Query: 1   GNRNLCGGIAALELPNCDKHSGGSKVKMQRDERITFSVIMELIVGVAALGIVSGLVLKFS 180
           GN NLCGG+  L LP C   S G K K     R    +++ +I+G+ +L +++  V+   
Sbjct: 615 GNYNLCGGVPKLHLPICVTSSTGEKRK-----RPAAKLLVPVIIGITSLSLLAFFVIILL 669

Query: 181 RKKNTSKIQANADNDDVDSFEGEHLLYTYHDLRIATGNFHAENVIGVGNFGRVYKG 348
           R+K +       D     SF  + L  ++ DL  AT  F   N+IGVG++G VYKG
Sbjct: 670 RRKKSRN-----DVSYTQSFNNQFLRISFADLHKATEGFSESNMIGVGSYGSVYKG 720


>ref|XP_002528852.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223531703|gb|EEF33526.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 688

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 47/116 (40%), Positives = 63/116 (54%)
 Frame = +1

Query: 1   GNRNLCGGIAALELPNCDKHSGGSKVKMQRDERITFSVIMELIVGVAALGIVSGLVLKFS 180
           GN NLCGGI AL LP C           Q+  R+  SV +++IV V ++ I +GLVL   
Sbjct: 360 GNTNLCGGIRALGLPAC--------TSQQQKRRL--SVKLKIIVSVVSVIIGAGLVLACL 409

Query: 181 RKKNTSKIQANADNDDVDSFEGEHLLYTYHDLRIATGNFHAENVIGVGNFGRVYKG 348
               + K + +A +    SFE E L  +Y  L  AT  F ++N+IG G FG VYKG
Sbjct: 410 FLWRSRKSKGDATSS---SFEKELLRLSYQSLLKATNGFSSDNLIGSGGFGSVYKG 462


>ref|XP_003616614.1| Receptor kinase-like protein [Medicago truncatula]
           gi|355517949|gb|AES99572.1| Receptor kinase-like protein
           [Medicago truncatula]
          Length = 721

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/116 (35%), Positives = 55/116 (47%)
 Frame = +1

Query: 1   GNRNLCGGIAALELPNCDKHSGGSKVKMQRDERITFSVIMELIVGVAALGIVSGLVLKFS 180
           GN+NLCGGI  L+LP C K       K  + + +  SVI   ++ V    IV  L  K  
Sbjct: 611 GNKNLCGGIPQLQLPPCIKLPAKKHKKSLKKKLVIISVIGGFVISVITFIIVHFLTRKSK 670

Query: 181 RKKNTSKIQANADNDDVDSFEGEHLLYTYHDLRIATGNFHAENVIGVGNFGRVYKG 348
           R  ++             S   E L  TY +L  AT  F + N++G G+FG VYKG
Sbjct: 671 RLPSS------------PSLRNEKLRVTYGELHEATNGFSSSNLVGTGSFGSVYKG 714


Top