BLASTX nr result

ID: Cimicifuga21_contig00039124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039124
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151004.1| PREDICTED: uncharacterized protein LOC101212...   165   3e-39
ref|XP_002885364.1| extracellular ligand-gated ion channel [Arab...   165   3e-39
ref|NP_001031167.1| uncharacterized protein [Arabidopsis thalian...   162   2e-38
ref|NP_564578.1| uncharacterized protein [Arabidopsis thaliana] ...   162   2e-38
ref|XP_002894263.1| predicted protein [Arabidopsis lyrata subsp....   162   2e-38

>ref|XP_004151004.1| PREDICTED: uncharacterized protein LOC101212672 [Cucumis sativus]
           gi|449482633|ref|XP_004156355.1| PREDICTED:
           uncharacterized protein LOC101230635 [Cucumis sativus]
          Length = 434

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/124 (62%), Positives = 93/124 (75%)
 Frame = +2

Query: 11  VLLNKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHF 190
           ++  K+ +F RS SHA DEL SFR+ LRWMCVDQS+ W A LSW      AII+P  SHF
Sbjct: 9   LISRKSSVFKRSVSHAHDELHSFRSYLRWMCVDQSDIWTAGLSWSMFFLFAIIVPATSHF 68

Query: 191 GLACAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVR 370
            LAC+ CD    RP+D +VQLSL+SVAT+SFLCLS F+R+YGLRRFL+ DKLC ESE VR
Sbjct: 69  VLACSSCDSNHARPFDRVVQLSLSSVATVSFLCLSSFIRRYGLRRFLFFDKLCDESETVR 128

Query: 371 HGYT 382
            GYT
Sbjct: 129 RGYT 132


>ref|XP_002885364.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp.
           lyrata] gi|297331204|gb|EFH61623.1| extracellular
           ligand-gated ion channel [Arabidopsis lyrata subsp.
           lyrata]
          Length = 451

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/123 (64%), Positives = 92/123 (74%)
 Frame = +2

Query: 14  LLNKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHFG 193
           L+N+   F+RS SHA DELQSFR  LRWMCVDQS+PW A LSW       +++P  SHF 
Sbjct: 24  LINRETKFTRSVSHAQDELQSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLVVPATSHFM 83

Query: 194 LACAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVRH 373
           LACA+CD   +RPYD +VQLSL+S A +SFLCLSRFV KYGLRRFL+ DKL  ESE VR 
Sbjct: 84  LACADCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDESETVRR 143

Query: 374 GYT 382
           GYT
Sbjct: 144 GYT 146


>ref|NP_001031167.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332194452|gb|AEE32573.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 428

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/121 (63%), Positives = 90/121 (74%)
 Frame = +2

Query: 20  NKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHFGLA 199
           N NKIF+R  SH  DEL SFR  LRWMCVD S+PW A LSW       +++P +SHF LA
Sbjct: 21  NTNKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLA 80

Query: 200 CAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVRHGY 379
           CA+CD   +RPYD +VQLSL+SVAT+SFLCL+RFV KYGLRRFL+ DKL  ESE VR  Y
Sbjct: 81  CADCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNY 140

Query: 380 T 382
           T
Sbjct: 141 T 141


>ref|NP_564578.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9454549|gb|AAF87872.1|AC012561_5 Unknown protein
           [Arabidopsis thaliana] gi|332194451|gb|AEE32572.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 453

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/121 (63%), Positives = 90/121 (74%)
 Frame = +2

Query: 20  NKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHFGLA 199
           N NKIF+R  SH  DEL SFR  LRWMCVD S+PW A LSW       +++P +SHF LA
Sbjct: 21  NTNKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLA 80

Query: 200 CAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVRHGY 379
           CA+CD   +RPYD +VQLSL+SVAT+SFLCL+RFV KYGLRRFL+ DKL  ESE VR  Y
Sbjct: 81  CADCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNY 140

Query: 380 T 382
           T
Sbjct: 141 T 141


>ref|XP_002894263.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340105|gb|EFH70522.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 448

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/121 (63%), Positives = 90/121 (74%)
 Frame = +2

Query: 20  NKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHFGLA 199
           NK KIF+R  SH  DEL SFR  LRWMCVD S+PW A LSW       +++P +SHF LA
Sbjct: 20  NKKKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFVVFTLVVPAISHFLLA 79

Query: 200 CAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVRHGY 379
           CA+CD   +RPYD +VQLSL+SVAT+SFLCL+RFV KYGLRRFL+ DKL  ESE VR  Y
Sbjct: 80  CADCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNY 139

Query: 380 T 382
           T
Sbjct: 140 T 140


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