BLASTX nr result
ID: Cimicifuga21_contig00039124
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00039124 (386 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004151004.1| PREDICTED: uncharacterized protein LOC101212... 165 3e-39 ref|XP_002885364.1| extracellular ligand-gated ion channel [Arab... 165 3e-39 ref|NP_001031167.1| uncharacterized protein [Arabidopsis thalian... 162 2e-38 ref|NP_564578.1| uncharacterized protein [Arabidopsis thaliana] ... 162 2e-38 ref|XP_002894263.1| predicted protein [Arabidopsis lyrata subsp.... 162 2e-38 >ref|XP_004151004.1| PREDICTED: uncharacterized protein LOC101212672 [Cucumis sativus] gi|449482633|ref|XP_004156355.1| PREDICTED: uncharacterized protein LOC101230635 [Cucumis sativus] Length = 434 Score = 165 bits (418), Expect = 3e-39 Identities = 78/124 (62%), Positives = 93/124 (75%) Frame = +2 Query: 11 VLLNKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHF 190 ++ K+ +F RS SHA DEL SFR+ LRWMCVDQS+ W A LSW AII+P SHF Sbjct: 9 LISRKSSVFKRSVSHAHDELHSFRSYLRWMCVDQSDIWTAGLSWSMFFLFAIIVPATSHF 68 Query: 191 GLACAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVR 370 LAC+ CD RP+D +VQLSL+SVAT+SFLCLS F+R+YGLRRFL+ DKLC ESE VR Sbjct: 69 VLACSSCDSNHARPFDRVVQLSLSSVATVSFLCLSSFIRRYGLRRFLFFDKLCDESETVR 128 Query: 371 HGYT 382 GYT Sbjct: 129 RGYT 132 >ref|XP_002885364.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp. lyrata] gi|297331204|gb|EFH61623.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp. lyrata] Length = 451 Score = 165 bits (418), Expect = 3e-39 Identities = 79/123 (64%), Positives = 92/123 (74%) Frame = +2 Query: 14 LLNKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHFG 193 L+N+ F+RS SHA DELQSFR LRWMCVDQS+PW A LSW +++P SHF Sbjct: 24 LINRETKFTRSVSHAQDELQSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLVVPATSHFM 83 Query: 194 LACAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVRH 373 LACA+CD +RPYD +VQLSL+S A +SFLCLSRFV KYGLRRFL+ DKL ESE VR Sbjct: 84 LACADCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDESETVRR 143 Query: 374 GYT 382 GYT Sbjct: 144 GYT 146 >ref|NP_001031167.1| uncharacterized protein [Arabidopsis thaliana] gi|332194452|gb|AEE32573.1| uncharacterized protein [Arabidopsis thaliana] Length = 428 Score = 162 bits (411), Expect = 2e-38 Identities = 77/121 (63%), Positives = 90/121 (74%) Frame = +2 Query: 20 NKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHFGLA 199 N NKIF+R SH DEL SFR LRWMCVD S+PW A LSW +++P +SHF LA Sbjct: 21 NTNKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLA 80 Query: 200 CAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVRHGY 379 CA+CD +RPYD +VQLSL+SVAT+SFLCL+RFV KYGLRRFL+ DKL ESE VR Y Sbjct: 81 CADCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNY 140 Query: 380 T 382 T Sbjct: 141 T 141 >ref|NP_564578.1| uncharacterized protein [Arabidopsis thaliana] gi|9454549|gb|AAF87872.1|AC012561_5 Unknown protein [Arabidopsis thaliana] gi|332194451|gb|AEE32572.1| uncharacterized protein [Arabidopsis thaliana] Length = 453 Score = 162 bits (411), Expect = 2e-38 Identities = 77/121 (63%), Positives = 90/121 (74%) Frame = +2 Query: 20 NKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHFGLA 199 N NKIF+R SH DEL SFR LRWMCVD S+PW A LSW +++P +SHF LA Sbjct: 21 NTNKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLA 80 Query: 200 CAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVRHGY 379 CA+CD +RPYD +VQLSL+SVAT+SFLCL+RFV KYGLRRFL+ DKL ESE VR Y Sbjct: 81 CADCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNY 140 Query: 380 T 382 T Sbjct: 141 T 141 >ref|XP_002894263.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297340105|gb|EFH70522.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 448 Score = 162 bits (411), Expect = 2e-38 Identities = 77/121 (63%), Positives = 90/121 (74%) Frame = +2 Query: 20 NKNKIFSRSKSHAGDELQSFRTCLRWMCVDQSNPWRASLSWXXXXXXAIIMPILSHFGLA 199 NK KIF+R SH DEL SFR LRWMCVD S+PW A LSW +++P +SHF LA Sbjct: 20 NKKKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFVVFTLVVPAISHFLLA 79 Query: 200 CAECDEKLNRPYDGIVQLSLTSVATISFLCLSRFVRKYGLRRFLYLDKLCGESERVRHGY 379 CA+CD +RPYD +VQLSL+SVAT+SFLCL+RFV KYGLRRFL+ DKL ESE VR Y Sbjct: 80 CADCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNY 139 Query: 380 T 382 T Sbjct: 140 T 140