BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039096
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   190   7e-51
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]                    173   3e-49
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]                    173   3e-49
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|...   173   6e-49
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]                    173   6e-49

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  190 bits (483), Expect(2) = 7e-51
 Identities = 96/239 (40%), Positives = 141/239 (58%), Gaps = 12/239 (5%)
 Frame = +2

Query: 14   NLLSVAKFTTDN-VGFYFTPQGYTITDLSSGTPLFQGPCKDGLYPISVLQSPISSLVAIS 190
            NL+S+ +F  DN   F  T  G+ + +  +G  L QG  ++GLYP++  ++   SL  +S
Sbjct: 389  NLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGVVENGLYPLAGCKTFHKSLTCLS 448

Query: 191  S--------DVWHNRLDHPKTKVLSRLRQNKLLDFKLQSS---FCK*CVIGKSTHLPFTN 337
            +        D WH+RL HP + + + L  +  L  K  S+   FC  C +GK+  LPF  
Sbjct: 449  TTIGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPE 508

Query: 338  SNKIHASFPFQLVHSDVWMSPILSVFGFKYYVLFTDDFTRYTWIFPMKHKNEVFTHFQTL 517
            S++  +S P  L+HSDVW+SP+ S  G  YYVLF DD++RY+W++P+  K++VF  F   
Sbjct: 509  SSR-QSSVPLALIHSDVWVSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKF 567

Query: 518  HNTINNLFGTTIKQFQSDGVGEYDNTPFRTFCRNLGIHHRFSCPHTPEQNGIAEQKHRH 694
                  LF T+IKQ Q+D  GE+ +  F+ F    GI HR +CPHT +QNGI E+KHRH
Sbjct: 568  KTIAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHTSQQNGIVERKHRH 626



 Score = 37.0 bits (84), Expect(2) = 7e-51
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +3

Query: 681 KNIDIADMARTLLTTAIVPLTLWVEAVSTAVYLINRLPSPIL 806
           K+  I +M  TLL  + +    WV+A  T+V+LINRLP+ +L
Sbjct: 623 KHRHIQEMGLTLLAQSSLSPQYWVDAFLTSVFLINRLPTKVL 664


>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  173 bits (439), Expect(2) = 3e-49
 Identities = 100/245 (40%), Positives = 137/245 (55%), Gaps = 14/245 (5%)
 Frame = +2

Query: 2    DMHKNLLSVAKF-TTDNVGFYFTPQGYTITDLSSGTPLFQGPCKDGLYP--------ISV 154
            ++HKNL+SV +   T+ V   F P  + + DL++G PL QG  KD LY         +S+
Sbjct: 393  NIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSM 452

Query: 155  LQSPISSLVAISSDVWHNRLDHPKTKVLSRLRQNKLL-----DFKLQSSFCK*CVIGKST 319
              SP S     S   WH+RL HP   +L+ +  N  L       KL S  C  C I KS 
Sbjct: 453  FASPCSKATHCS---WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS--CSDCFINKSH 507

Query: 320  HLPFTNSNKIHASFPFQLVHSDVWMSPILSVFGFKYYVLFTDDFTRYTWIFPMKHKNEVF 499
             +PF+NS  I +S P + ++SDVW SPILS+  ++YYV+F D FTRYTW++P+K K++V 
Sbjct: 508  KVPFSNST-ITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 566

Query: 500  THFQTLHNTINNLFGTTIKQFQSDGVGEYDNTPFRTFCRNLGIHHRFSCPHTPEQNGIAE 679
              F    + + N F T I    SD  GE+     R +    GI H  S PHTPE NG++E
Sbjct: 567  DTFIIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSE 624

Query: 680  QKHRH 694
            +KHRH
Sbjct: 625  RKHRH 629



 Score = 48.5 bits (114), Expect(2) = 3e-49
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +3

Query: 681 KNIDIADMARTLLTTAIVPLTLWVEAVSTAVYLINRLPSPIL 806
           K+  I +M  TLL+ A VP T W+ A S AVYLINRLP+P+L
Sbjct: 626 KHRHIVEMGLTLLSHASVPKTYWLYAFSVAVYLINRLPTPLL 667


>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  173 bits (439), Expect(2) = 3e-49
 Identities = 100/245 (40%), Positives = 137/245 (55%), Gaps = 14/245 (5%)
 Frame = +2

Query: 2    DMHKNLLSVAKF-TTDNVGFYFTPQGYTITDLSSGTPLFQGPCKDGLYP--------ISV 154
            ++HKNL+SV +   T+ V   F P  + + DL++G PL QG  KD LY         +S+
Sbjct: 393  NIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSM 452

Query: 155  LQSPISSLVAISSDVWHNRLDHPKTKVLSRLRQNKLL-----DFKLQSSFCK*CVIGKST 319
              SP S     S   WH+RL HP   +L+ +  N  L       KL S  C  C I KS 
Sbjct: 453  FASPCSKATHCS---WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS--CSDCFINKSH 507

Query: 320  HLPFTNSNKIHASFPFQLVHSDVWMSPILSVFGFKYYVLFTDDFTRYTWIFPMKHKNEVF 499
             +PF+NS  I +S P + ++SDVW SPILS+  ++YYV+F D FTRYTW++P+K K++V 
Sbjct: 508  KVPFSNST-ITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 566

Query: 500  THFQTLHNTINNLFGTTIKQFQSDGVGEYDNTPFRTFCRNLGIHHRFSCPHTPEQNGIAE 679
              F    + + N F T I    SD  GE+     R +    GI H  S PHTPE NG++E
Sbjct: 567  DTFIIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSE 624

Query: 680  QKHRH 694
            +KHRH
Sbjct: 625  RKHRH 629



 Score = 48.5 bits (114), Expect(2) = 3e-49
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +3

Query: 681 KNIDIADMARTLLTTAIVPLTLWVEAVSTAVYLINRLPSPIL 806
           K+  I +M  TLL+ A VP T W+ A S AVYLINRLP+P+L
Sbjct: 626 KHRHIVEMGLTLLSHASVPKTYWLYAFSVAVYLINRLPTPLL 667


>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  173 bits (439), Expect(2) = 6e-49
 Identities = 98/242 (40%), Positives = 136/242 (56%), Gaps = 11/242 (4%)
 Frame = +2

Query: 2    DMHKNLLSVAKF-TTDNVGFYFTPQGYTITDLSSGTPLFQGPCKDGLYPISVLQSPISSL 178
            ++HKNL+SV +   T+ V   F P  + + DL++G PL QG  KD LY   +  S   S+
Sbjct: 393  NIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSM 452

Query: 179  VA-----ISSDVWHNRLDHPKTKVLSRLRQNKLL-----DFKLQSSFCK*CVIGKSTHLP 328
             A      +   WH+RL HP   +L+ +  N  L       KL S  C  C I KS  +P
Sbjct: 453  FASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS--CSDCFINKSHKVP 510

Query: 329  FTNSNKIHASFPFQLVHSDVWMSPILSVFGFKYYVLFTDDFTRYTWIFPMKHKNEVFTHF 508
            F+NS  I +S P + ++SDVW SPILS+  ++YYV+F D FTRYTW++P+K K++V   F
Sbjct: 511  FSNST-ITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTF 569

Query: 509  QTLHNTINNLFGTTIKQFQSDGVGEYDNTPFRTFCRNLGIHHRFSCPHTPEQNGIAEQKH 688
                + + N F T I    SD  GE+     R +    GI H  S PHTPE NG++E+KH
Sbjct: 570  IIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKH 627

Query: 689  RH 694
            RH
Sbjct: 628  RH 629



 Score = 47.4 bits (111), Expect(2) = 6e-49
 Identities = 24/42 (57%), Positives = 29/42 (69%)
 Frame = +3

Query: 681 KNIDIADMARTLLTTAIVPLTLWVEAVSTAVYLINRLPSPIL 806
           K+  I +M  TLL+ A VP T W  A S AVYLINRLP+P+L
Sbjct: 626 KHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLL 667


>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  173 bits (439), Expect(2) = 6e-49
 Identities = 98/242 (40%), Positives = 136/242 (56%), Gaps = 11/242 (4%)
 Frame = +2

Query: 2    DMHKNLLSVAKF-TTDNVGFYFTPQGYTITDLSSGTPLFQGPCKDGLYPISVLQSPISSL 178
            ++HKNL+SV +   T+ V   F P  + + DL++G PL QG  KD LY   +  S   S+
Sbjct: 393  NIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSM 452

Query: 179  VA-----ISSDVWHNRLDHPKTKVLSRLRQNKLL-----DFKLQSSFCK*CVIGKSTHLP 328
             A      +   WH+RL HP   +L+ +  N  L       KL S  C  C I KS  +P
Sbjct: 453  FASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS--CSDCFINKSHKVP 510

Query: 329  FTNSNKIHASFPFQLVHSDVWMSPILSVFGFKYYVLFTDDFTRYTWIFPMKHKNEVFTHF 508
            F+NS  I +S P + ++SDVW SPILS+  ++YYV+F D FTRYTW++P+K K++V   F
Sbjct: 511  FSNST-ITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTF 569

Query: 509  QTLHNTINNLFGTTIKQFQSDGVGEYDNTPFRTFCRNLGIHHRFSCPHTPEQNGIAEQKH 688
                + + N F T I    SD  GE+     R +    GI H  S PHTPE NG++E+KH
Sbjct: 570  IIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKH 627

Query: 689  RH 694
            RH
Sbjct: 628  RH 629



 Score = 47.4 bits (111), Expect(2) = 6e-49
 Identities = 24/42 (57%), Positives = 29/42 (69%)
 Frame = +3

Query: 681 KNIDIADMARTLLTTAIVPLTLWVEAVSTAVYLINRLPSPIL 806
           K+  I +M  TLL+ A VP T W  A S AVYLINRLP+P+L
Sbjct: 626 KHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLL 667