BLASTX nr result

ID: Cimicifuga21_contig00039095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039095
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509525.1| ATP binding protein, putative [Ricinus commu...   136   2e-30
ref|XP_003553846.1| PREDICTED: fidgetin-like protein 1-like [Gly...   135   3e-30
ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vit...   133   1e-29
emb|CBI21358.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_003524613.1| PREDICTED: fidgetin-like protein 1-like [Gly...   132   3e-29

>ref|XP_002509525.1| ATP binding protein, putative [Ricinus communis]
           gi|223549424|gb|EEF50912.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 660

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/101 (67%), Positives = 78/101 (77%)
 Frame = -2

Query: 304 ASLSPQNDNSINXXXXXXXXXXXXXXXXXSFVPPIRSNGSNTGHMTSRNSGKGDDALDDS 125
           AS+SPQ D+S N                 +FVPPI+SNG +T +MT+R  GKGDDALDDS
Sbjct: 281 ASVSPQGDSS-NRNYGARSYGFSRRGIRGNFVPPIKSNGGSTANMTARVGGKGDDALDDS 339

Query: 124 TKRCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNV 2
           T+RCLE+LCGPDGELPEKLRNLEPRL+EHVSNEIMDRDPNV
Sbjct: 340 TRRCLEMLCGPDGELPEKLRNLEPRLLEHVSNEIMDRDPNV 380


>ref|XP_003553846.1| PREDICTED: fidgetin-like protein 1-like [Glycine max]
          Length = 659

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/102 (67%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
 Frame = -2

Query: 304 ASLSPQNDN-SINXXXXXXXXXXXXXXXXXSFVPPIRSNGSNTGHMTSRNSGKGDDALDD 128
           AS+SPQ DN S N                 +FVPPI+SNG+N G+M++R +GK DD+LDD
Sbjct: 278 ASVSPQCDNNSANRLYGGRSYGVSRRGVRGNFVPPIKSNGNNAGNMSARVAGKCDDSLDD 337

Query: 127 STKRCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNV 2
           STK+CLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNV
Sbjct: 338 STKKCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNV 379


>ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vitis vinifera]
          Length = 668

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/102 (66%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = -2

Query: 304 ASLSPQNDNSI-NXXXXXXXXXXXXXXXXXSFVPPIRSNGSNTGHMTSRNSGKGDDALDD 128
           AS+SPQ+DN+  +                 +FVPPIRSNG N  +MTS+ +GKGDDALDD
Sbjct: 287 ASVSPQSDNNFTSRGYGAKSYGFPRRGIRGNFVPPIRSNGGNASNMTSQIAGKGDDALDD 346

Query: 127 STKRCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNV 2
           STKRCLE+L GPDGE+PEKLRNLEPRLIEHVSNEIMDRDPNV
Sbjct: 347 STKRCLEMLYGPDGEVPEKLRNLEPRLIEHVSNEIMDRDPNV 388


>emb|CBI21358.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/102 (66%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = -2

Query: 304 ASLSPQNDNSI-NXXXXXXXXXXXXXXXXXSFVPPIRSNGSNTGHMTSRNSGKGDDALDD 128
           AS+SPQ+DN+  +                 +FVPPIRSNG N  +MTS+ +GKGDDALDD
Sbjct: 272 ASVSPQSDNNFTSRGYGAKSYGFPRRGIRGNFVPPIRSNGGNASNMTSQIAGKGDDALDD 331

Query: 127 STKRCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNV 2
           STKRCLE+L GPDGE+PEKLRNLEPRLIEHVSNEIMDRDPNV
Sbjct: 332 STKRCLEMLYGPDGEVPEKLRNLEPRLIEHVSNEIMDRDPNV 373


>ref|XP_003524613.1| PREDICTED: fidgetin-like protein 1-like [Glycine max]
          Length = 659

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/102 (65%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = -2

Query: 304 ASLSPQNDN-SINXXXXXXXXXXXXXXXXXSFVPPIRSNGSNTGHMTSRNSGKGDDALDD 128
           AS+SPQ DN S N                 +FVPPI+SNG+N G+ ++R +GK DD+LDD
Sbjct: 278 ASVSPQCDNNSANRLYGGRSYGVPRRGVRGNFVPPIKSNGNNAGNTSTRIAGKCDDSLDD 337

Query: 127 STKRCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNV 2
           STK+CLEILCGPDGELPEKLRNL+PRLIEHVSNEIMDRDPNV
Sbjct: 338 STKKCLEILCGPDGELPEKLRNLDPRLIEHVSNEIMDRDPNV 379


Top