BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039082
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                167   6e-40
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              150   1e-34
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   150   1e-34
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...   150   1e-34
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   150   1e-34

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  167 bits (424), Expect = 6e-40
 Identities = 90/152 (59%), Positives = 114/152 (75%)
 Frame = +3

Query: 3    KQAPRAWYEALQSAIHILGFTQFKSDHSLFTKKEFNVTTYILIYVDDILITNNSTTHLQI 182
            KQAPRAWYEA  +AI  LGF+   SD SLF K++ ++T +IL+YVDDI+IT +S T  Q 
Sbjct: 1299 KQAPRAWYEAFYTAILSLGFSSSHSDTSLFIKRDTSIT-FILVYVDDIIITGSSVTECQS 1357

Query: 183  LISQLGTSFALKDLGNLHYFLGLEVLRNDKGIFLTQSKYAADLLKNAKMDTAKPCSTPCP 362
            +ISQL T F +KDLG+++YFLG+EV ++D+G+ L Q+KYA DLLK   M  AKPC+TP  
Sbjct: 1358 IISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTDMLGAKPCATPV- 1416

Query: 363  SGFKLDSTSGELLADGSEYRSLVGALQYLTWT 458
            S  KLD  SG LL+D + YRS VGALQYLTWT
Sbjct: 1417 STSKLDH-SGTLLSDPTSYRSTVGALQYLTWT 1447


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/152 (49%), Positives = 100/152 (65%)
 Frame = +3

Query: 3    KQAPRAWYEALQSAIHILGFTQFKSDHSLFTKKEFNVTTYILIYVDDILITNNSTTHLQI 182
            KQAPRAW+      +  LGF + ++D+S+FT     +   +LIYVDDILIT N+++H+  
Sbjct: 1024 KQAPRAWFRCFSDYLEELGFLESRADYSMFTFNNRGIYIILLIYVDDILITGNNSSHISH 1083

Query: 183  LISQLGTSFALKDLGNLHYFLGLEVLRNDKGIFLTQSKYAADLLKNAKMDTAKPCSTPCP 362
            LI  L + F++KDLG++HYFLG+E + N   + LTQ KY  DLLK  K+  ++P  TP  
Sbjct: 1084 LIHNLNSLFSMKDLGSVHYFLGIETVYNGDHLHLTQHKYIVDLLKKTKLHDSRPYPTPVL 1143

Query: 363  SGFKLDSTSGELLADGSEYRSLVGALQYLTWT 458
            SG KL    G  L D SEYRS+VGALQYLT T
Sbjct: 1144 SGKKLSVYDGVKLEDPSEYRSIVGALQYLTLT 1175


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  150 bits (378), Expect = 1e-34
 Identities = 76/152 (50%), Positives = 99/152 (65%)
 Frame = +3

Query: 3    KQAPRAWYEALQSAIHILGFTQFKSDHSLFTKKEFNVTTYILIYVDDILITNNSTTHLQI 182
            KQAPRAW+E L  A+   GF   KSD SLF +   N  TY+L+YVDDIL+  + T  +  
Sbjct: 1087 KQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITS 1146

Query: 183  LISQLGTSFALKDLGNLHYFLGLEVLRNDKGIFLTQSKYAADLLKNAKMDTAKPCSTPCP 362
            LI+QL + F+LKDLG +HYFLG++V   + G+ L+Q+KY  DLL+  KM   KP  TP P
Sbjct: 1147 LIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLP 1206

Query: 363  SGFKLDSTSGELLADGSEYRSLVGALQYLTWT 458
            +G KL    G+ + D   YRS VGALQY+T T
Sbjct: 1207 TGLKLRVGDGDPVEDLHGYRSTVGALQYVTIT 1238


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/152 (50%), Positives = 104/152 (68%)
 Frame = +3

Query: 3    KQAPRAWYEALQSAIHILGFTQFKSDHSLFTKKEFNVTTYILIYVDDILITNNSTTHLQI 182
            KQAPRAWY+   + I  LGFT   SD SLF  K+ +   Y+L+YVDDIL+T +ST+ LQ 
Sbjct: 786  KQAPRAWYQRFATYIRQLGFTSSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQH 845

Query: 183  LISQLGTSFALKDLGNLHYFLGLEVLRNDKGIFLTQSKYAADLLKNAKMDTAKPCSTPCP 362
            + ++L + FA+ DLG+LH+FLG+ V R+  G+FL+Q +YA DLL+ A M    P +TP  
Sbjct: 846  ITARLHSEFAMTDLGDLHFFLGISVTRSADGLFLSQWQYAVDLLRRAGMSECHPTATPVD 905

Query: 363  SGFKLDSTSGELLADGSEYRSLVGALQYLTWT 458
            +  KL +T G  ++D  EYRSL GALQYLT T
Sbjct: 906  ARCKLSATDGAPVSDPMEYRSLAGALQYLTLT 937


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/152 (50%), Positives = 104/152 (68%)
 Frame = +3

Query: 3    KQAPRAWYEALQSAIHILGFTQFKSDHSLFTKKEFNVTTYILIYVDDILITNNSTTHLQI 182
            KQAPRAWY+   + I  LGFT   SD SLF  K+ +   Y+L+YVDDIL+T +ST+ LQ 
Sbjct: 986  KQAPRAWYQRFATYIRQLGFTSSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQH 1045

Query: 183  LISQLGTSFALKDLGNLHYFLGLEVLRNDKGIFLTQSKYAADLLKNAKMDTAKPCSTPCP 362
            + ++L + FA+ DLG+LH+FLG+ V R+  G+FL+Q +YA DLL+ A M    P +TP  
Sbjct: 1046 ITARLHSEFAMTDLGDLHFFLGISVTRSADGLFLSQWQYAVDLLRRAGMSECHPTATPVD 1105

Query: 363  SGFKLDSTSGELLADGSEYRSLVGALQYLTWT 458
            +  KL +T G  ++D  EYRSL GALQYLT T
Sbjct: 1106 ARCKLSATDGAPVSDPMEYRSLAGALQYLTLT 1137