BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039076
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...   194   5e-48
ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...   186   1e-45
ref|XP_002315631.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45

>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score =  194 bits (494), Expect = 5e-48
 Identities = 87/119 (73%), Positives = 104/119 (87%)
 Frame = -1

Query: 358 GKAKQIDRMLLLINEMREGNHVTLNTIAKVMRRLAGAGKWENAIKIFDDLGTFGLEKNTE 179
           GK KQ+D+M  L+ EMR+GN V L+T+AK MRRLAGAG+WE+A+++FDDLG F LEKNTE
Sbjct: 123 GKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEKNTE 182

Query: 178 TMNLLLDTLCKEKRVESARDVFLELKPHIPPNAHTFNIFVHGWCKYNRVDEAHWTLQEM 2
           +MNLLLDTLCKE++VE AR +FLELKPHI PN HTFNIF+HGWCK NRVDEA WT+QEM
Sbjct: 183 SMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHGWCKANRVDEAEWTIQEM 241


>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score =  186 bits (473), Expect = 1e-45
 Identities = 82/119 (68%), Positives = 102/119 (85%)
 Frame = -1

Query: 358 GKAKQIDRMLLLINEMREGNHVTLNTIAKVMRRLAGAGKWENAIKIFDDLGTFGLEKNTE 179
           GK KQ+D+M  L+ EM +G HVTL T+ K MRR AGA +WEN +++FD LGTFGLEKNTE
Sbjct: 96  GKMKQMDQMEFLLEEMEKGQHVTLKTVGKAMRRFAGARQWENVLRVFDKLGTFGLEKNTE 155

Query: 178 TMNLLLDTLCKEKRVESARDVFLELKPHIPPNAHTFNIFVHGWCKYNRVDEAHWTLQEM 2
           +MNLLLDTLCKE++VE AR++FL+LK HI PNA+TFNIF+HGWCK NRV+EA+WT+QEM
Sbjct: 156 SMNLLLDTLCKERKVELAREIFLDLKSHISPNANTFNIFIHGWCKVNRVEEAYWTIQEM 214


>ref|XP_002315631.1| predicted protein [Populus trichocarpa] gi|222864671|gb|EEF01802.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  186 bits (471), Expect = 2e-45
 Identities = 85/119 (71%), Positives = 100/119 (84%)
 Frame = -1

Query: 358 GKAKQIDRMLLLINEMREGNHVTLNTIAKVMRRLAGAGKWENAIKIFDDLGTFGLEKNTE 179
           GK KQ+D+M  L+ EM   + VTLNT+ K MRR +GAGKWE+A+++FD+LGTFGLEKN E
Sbjct: 85  GKMKQMDQMRELLEEMNRNHLVTLNTVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAE 144

Query: 178 TMNLLLDTLCKEKRVESARDVFLELKPHIPPNAHTFNIFVHGWCKYNRVDEAHWTLQEM 2
           +MNLLLDTLCKE +VE AR +FLELK HI PNAHTFNIF+HGWCK N VDEAHWTLQEM
Sbjct: 145 SMNLLLDTLCKEGKVEQARAIFLELKSHILPNAHTFNIFIHGWCKANLVDEAHWTLQEM 203


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score =  184 bits (466), Expect = 8e-45
 Identities = 81/119 (68%), Positives = 103/119 (86%)
 Frame = -1

Query: 358 GKAKQIDRMLLLINEMREGNHVTLNTIAKVMRRLAGAGKWENAIKIFDDLGTFGLEKNTE 179
           GK KQ+ +M  ++ EM+E   VTL+T+AK MRR AGAG+WENA++IFDDL T+GLEKNTE
Sbjct: 118 GKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTE 177

Query: 178 TMNLLLDTLCKEKRVESARDVFLELKPHIPPNAHTFNIFVHGWCKYNRVDEAHWTLQEM 2
           +MN+LLDTLCKEK+VE AR ++LELK HI PNA+TFN+F+HGWCK N++DEAHWTL+EM
Sbjct: 178 SMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEM 236


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  184 bits (466), Expect = 8e-45
 Identities = 81/119 (68%), Positives = 103/119 (86%)
 Frame = -1

Query: 358 GKAKQIDRMLLLINEMREGNHVTLNTIAKVMRRLAGAGKWENAIKIFDDLGTFGLEKNTE 179
           GK KQ+ +M  ++ EM+E   VTL+T+AK MRR AGAG+WENA++IFDDL T+GLEKNTE
Sbjct: 149 GKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTE 208

Query: 178 TMNLLLDTLCKEKRVESARDVFLELKPHIPPNAHTFNIFVHGWCKYNRVDEAHWTLQEM 2
           +MN+LLDTLCKEK+VE AR ++LELK HI PNA+TFN+F+HGWCK N++DEAHWTL+EM
Sbjct: 209 SMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEM 267