BLASTX nr result

ID: Cimicifuga21_contig00039073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039073
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271910.2| PREDICTED: uncharacterized protein LOC100242...   108   3e-22
ref|XP_002527930.1| conserved hypothetical protein [Ricinus comm...   102   3e-20
ref|XP_002315669.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002312674.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_003628944.1| UDP-galactose:fucoside alpha-3-galactosyltra...    86   4e-15

>ref|XP_002271910.2| PREDICTED: uncharacterized protein LOC100242526 [Vitis vinifera]
          Length = 874

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/109 (49%), Positives = 75/109 (68%)
 Frame = -3

Query: 370  RATLYPKGKTGSRKGVEGARIPIVDLTPQQKDLNVRIVHAGGLVELYQDGVCAFEVMEKY 191
            R   YP  +   RK V G    + +L+ Q  D  +RIVHAGG  E+YQ+ V A ++MEKY
Sbjct: 720  RFVRYPD-RESRRKNVGGTSTSL-NLSLQSNDFTIRIVHAGGREEVYQNAVLASQLMEKY 777

Query: 190  PGMHISRPEIFKQPHQSILHPYEKLLSGQKFYLVPSTTVRKLKRKYSKK 44
            PG+ ++RPE+FK PH+S+L P EKLL GQK+YL+P TT +KL R++ +K
Sbjct: 778  PGLCVARPEVFKNPHKSLLWPEEKLLPGQKYYLIPCTTAQKLMRRHPEK 826


>ref|XP_002527930.1| conserved hypothetical protein [Ricinus communis]
           gi|223532705|gb|EEF34487.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score =  102 bits (254), Expect = 3e-20
 Identities = 58/128 (45%), Positives = 78/128 (60%)
 Frame = -3

Query: 397 MLKRFSNLLRATLYPKGKTGSRKGVEGARIPIVDLTPQQKDLNVRIVHAGGLVELYQDGV 218
           MLK   +LL        ++  +K V  A I   +L  Q KD +VRIVHAGG  ELY   V
Sbjct: 1   MLKACVHLLGQNQGSHNESRRKKDVGIAPISF-NLRSQSKDFSVRIVHAGGREELYPHEV 59

Query: 217 CAFEVMEKYPGMHISRPEIFKQPHQSILHPYEKLLSGQKFYLVPSTTVRKLKRKYSKKPQ 38
            A  +MEKYPGM ++RPE+FK PHQS+L P E LL G K+ ++P++T RKLK +  +K +
Sbjct: 60  PASHLMEKYPGMRVARPEVFKNPHQSLLWPDEILLPGHKYLMIPTSTARKLKHRQIRKSR 119

Query: 37  ETTTSVDK 14
            T  +  K
Sbjct: 120 VTGNAEGK 127


>ref|XP_002315669.1| predicted protein [Populus trichocarpa] gi|222864709|gb|EEF01840.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/100 (48%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
 Frame = -3

Query: 346 KTGSRKGVEGARIPI-VDLTPQQKDLNVRIVHAGGLVELYQDGVCAFEVMEKYPGMHISR 170
           +T SR+ +E    PI VD   Q +D+ VRIVH GG  ELYQ  V A ++MEKYPG+ ++ 
Sbjct: 6   QTESRRKIELEGGPISVDSCIQSRDICVRIVHPGGREELYQHAVPASQLMEKYPGICVAH 65

Query: 169 PEIFKQPHQSILHPYEKLLSGQKFYLVPSTTVRKLKRKYS 50
           P +FK P +S++ P EKLL G K+ ++PSTT +KL  K++
Sbjct: 66  PGVFKNPQESLIWPDEKLLPGHKYLIIPSTTAQKLTHKHT 105


>ref|XP_002312674.1| predicted protein [Populus trichocarpa] gi|222852494|gb|EEE90041.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 47/97 (48%), Positives = 66/97 (68%)
 Frame = -3

Query: 334 RKGVEGARIPIVDLTPQQKDLNVRIVHAGGLVELYQDGVCAFEVMEKYPGMHISRPEIFK 155
           ++ +EGA I  V L    +D++VRIVH GG  ELYQ  + A  +MEKYPGM ++RP +FK
Sbjct: 12  KRELEGAPIS-VGLCILSRDISVRIVHPGGREELYQYALPASHLMEKYPGMCVARPGVFK 70

Query: 154 QPHQSILHPYEKLLSGQKFYLVPSTTVRKLKRKYSKK 44
            P +S+L P E LL G K+ L+PSTT +KL  K+ ++
Sbjct: 71  NPQESLLWPDENLLPGHKYLLIPSTTAQKLTLKHMER 107


>ref|XP_003628944.1| UDP-galactose:fucoside alpha-3-galactosyltransferase [Medicago
            truncatula] gi|355522966|gb|AET03420.1|
            UDP-galactose:fucoside alpha-3-galactosyltransferase
            [Medicago truncatula]
          Length = 1906

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
 Frame = -3

Query: 400  AMLKRFSNLL---RATLYPKGKTGSRKGVEGARIPIVDLTPQQKDLNVRIVHAGGLVELY 230
            AMLKR  + L     T     K+  +  ++G + P    + + KD  V+I HAGG  ++Y
Sbjct: 1697 AMLKRVVHSLGFVENTDNKDSKSKKKGNIKGYKDP--QFSSKSKDFVVKIAHAGGKQDVY 1754

Query: 229  QDGVCAFEVMEKYPGMHISRPEIFKQPHQSILHPYEKLLSGQKFYLVPSTTVRKLKRKYS 50
            +  V  + +M KYPGM I+ PE+FK PHQS+L   + LL G K+ L+    V KLKRK+ 
Sbjct: 1755 RHAVPVYALMTKYPGMCIASPEVFKSPHQSVLWKEDLLLPGHKYILISLKDVEKLKRKHP 1814

Query: 49   KK--PQETTTSVDK 14
            +K   +ET   V+K
Sbjct: 1815 EKDHTKETNGVVEK 1828


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