BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00039063
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
ref|XP_002528778.1| pentatricopeptide repeat-containing protein,...   144   6e-33
emb|CBI33923.3| unnamed protein product [Vitis vinifera]              103   1e-20

>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/130 (63%), Positives = 101/130 (77%)
 Frame = -2

Query: 390 QHSFAASRVIKKLCSHPYSIPQAVALFSHLDEPDAFMCNTIIRSYVNSYDLENAIRFYYE 211
           Q   AA R +K LCS P S+  AV+LF  L+EPDAF+CNTI+R+YVN  D   A+ FYYE
Sbjct: 89  QQPLAAGRAVKTLCSFPDSVQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYE 148

Query: 210 QMVGKCIAPNHYSFPLLAKICAELGSIREGKKTHARIVKFGLELDLYVRNSMIFMYSSFR 31
           QMV KC+APNHY+FPLL K+C E+GSI +G+K HARI+KFG ELDL+VRNS+I MYS   
Sbjct: 149 QMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCG 208

Query: 30  RIGDARKVFD 1
           RIGDAR +F+
Sbjct: 209 RIGDARAMFE 218


>ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|222870244|gb|EEF07375.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  172 bits (436), Expect = 3e-41
 Identities = 80/130 (61%), Positives = 102/130 (78%)
 Frame = -2

Query: 390 QHSFAASRVIKKLCSHPYSIPQAVALFSHLDEPDAFMCNTIIRSYVNSYDLENAIRFYYE 211
           QH FAASR IKKLC+   S+   V+L++H++EPDAFMCNTI+RS+VN  D   A+RFYYE
Sbjct: 88  QHPFAASRYIKKLCACLNSVSHCVSLYNHIEEPDAFMCNTIMRSFVNVNDPFGALRFYYE 147

Query: 210 QMVGKCIAPNHYSFPLLAKICAELGSIREGKKTHARIVKFGLELDLYVRNSMIFMYSSFR 31
           +M+ K + PNHY+FPL+AK+CA++GS+REG+K HA +VKFG ELDL+VRNS I  YS   
Sbjct: 148 KMIAKWVLPNHYTFPLVAKVCADIGSLREGQKVHALVVKFGFELDLFVRNSFIRFYSVCG 207

Query: 30  RIGDARKVFD 1
           R  DAR VFD
Sbjct: 208 RTSDARMVFD 217


>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/130 (58%), Positives = 92/130 (70%)
 Frame = -2

Query: 390 QHSFAASRVIKKLCSHPYSIPQAVALFSHLDEPDAFMCNTIIRSYVNSYDLENAIRFYYE 211
           QH   A+  IKKLCSH  + P+A  LF HL  PDAF CNTIIR+Y    D   A+RFYY 
Sbjct: 37  QHPLFATSAIKKLCSHSVTFPRATFLFDHLHHPDAFHCNTIIRAYARKPDFPAALRFYYC 96

Query: 210 QMVGKCIAPNHYSFPLLAKICAELGSIREGKKTHARIVKFGLELDLYVRNSMIFMYSSFR 31
           +M+ + + PNHY+FPLL K+C ++GS REG K HARIVKFG   DL+ RNS+I MYS F 
Sbjct: 97  KMLARSVPPNHYTFPLLIKVCTDIGSFREGLKGHARIVKFGFGSDLFARNSLIRMYSVFG 156

Query: 30  RIGDARKVFD 1
           RIG+AR VFD
Sbjct: 157 RIGNARMVFD 166


>ref|XP_002528778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531781|gb|EEF33600.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  144 bits (364), Expect = 6e-33
 Identities = 67/132 (50%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = -2

Query: 390 QHSFAASRVIKKLCSHPYSI-PQAVALFSHLDEPDAFMCNTIIRSYVN-SYDLENAIRFY 217
           QH  AA R IKKLC+  +++    V L+ ++++PDAF+CNTIIR +V+ + D   A+RFY
Sbjct: 84  QHPLAAGRYIKKLCNTYFNLLSHCVYLYDYIEQPDAFICNTIIRCFVSLNNDPFGALRFY 143

Query: 216 YEQMVGKCIAPNHYSFPLLAKICAELGSIREGKKTHARIVKFGLELDLYVRNSMIFMYSS 37
           Y++M+ K + PN Y+FPLL K+CA++GS++EG+K HA +VKFG E D YVRNS++ MYS+
Sbjct: 144 YDKMIAKWVLPNRYTFPLLVKVCADIGSLKEGQKAHACVVKFGFEFDAYVRNSLLHMYSA 203

Query: 36  FRRIGDARKVFD 1
             R+ DAR +F+
Sbjct: 204 CGRVLDARLLFE 215


>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/69 (68%), Positives = 58/69 (84%)
 Frame = -2

Query: 207 MVGKCIAPNHYSFPLLAKICAELGSIREGKKTHARIVKFGLELDLYVRNSMIFMYSSFRR 28
           MV KC+APNHY+FPLL K+C E+GSI +G+K HARI+KFG ELDL+VRNS+I MYS   R
Sbjct: 1   MVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGR 60

Query: 27  IGDARKVFD 1
           IGDAR +F+
Sbjct: 61  IGDARAMFE 69