BLASTX nr result
ID: Cimicifuga21_contig00039007
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00039007
(328 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17483.3| unnamed protein product [Vitis vinifera] 160 8e-38
ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat... 160 8e-38
emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera] 160 8e-38
ref|XP_002310258.1| predicted protein [Populus trichocarpa] gi|2... 154 6e-36
ref|XP_002522430.1| pentatricopeptide repeat-containing protein,... 138 5e-31
>emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 160 bits (406), Expect = 8e-38
Identities = 81/103 (78%), Positives = 88/103 (85%)
Frame = -3
Query: 311 HGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLV 132
+G L+HGY+VKTG VNSVFVGSALLDMYTK G++ G RVF EMP RNVVSWTAIITGLV
Sbjct: 141 YGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLV 200
Query: 131 RGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
R GYNKEAL+YFSEMW S V+ DSYTFA ALKACADSG LNY
Sbjct: 201 RAGYNKEALVYFSEMWRSR-VEYDSYTFAIALKACADSGALNY 242
Score = 85.1 bits (209), Expect = 5e-15
Identities = 46/108 (42%), Positives = 65/108 (60%)
Frame = -3
Query: 326 SDLLLHGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAI 147
S L +GR IH ++K GF S FV + L MY KCG++ G +F++M R+VVSWT I
Sbjct: 237 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 296
Query: 146 ITGLVRGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
IT LV+ G + A+ F M E SDV + YTFA+ + CA+ + +
Sbjct: 297 ITTLVQMGQEECAVQAFIRMRE-SDVSPNEYTFAAVISGCANLARIEW 343
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/102 (31%), Positives = 52/102 (50%)
Frame = -3
Query: 308 GRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLVR 129
G +H + G S+ V ++++ MY KCG+++ +F EM R++VSW+ II G +
Sbjct: 344 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ 403
Query: 128 GGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
GG+ EA S M + + AS L AC + L +
Sbjct: 404 GGHVSEAFELLSWM-RMEGPKPTEFALASVLSACGNMAILEH 444
>ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 160 bits (406), Expect = 8e-38
Identities = 81/103 (78%), Positives = 88/103 (85%)
Frame = -3
Query: 311 HGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLV 132
+G L+HGY+VKTG VNSVFVGSALLDMYTK G++ G RVF EMP RNVVSWTAIITGLV
Sbjct: 134 YGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193
Query: 131 RGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
R GYNKEAL+YFSEMW S V+ DSYTFA ALKACADSG LNY
Sbjct: 194 RAGYNKEALVYFSEMWRSR-VEYDSYTFAIALKACADSGALNY 235
Score = 85.1 bits (209), Expect = 5e-15
Identities = 46/108 (42%), Positives = 65/108 (60%)
Frame = -3
Query: 326 SDLLLHGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAI 147
S L +GR IH ++K GF S FV + L MY KCG++ G +F++M R+VVSWT I
Sbjct: 230 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 289
Query: 146 ITGLVRGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
IT LV+ G + A+ F M E SDV + YTFA+ + CA+ + +
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRE-SDVSPNEYTFAAVISGCANLARIEW 336
Score = 77.4 bits (189), Expect = 1e-12
Identities = 37/102 (36%), Positives = 59/102 (57%)
Frame = -3
Query: 320 LLLHGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIIT 141
+L HG+ +H Y + G ++ V SAL++MY KCG + R+FD ++VSWTA+I
Sbjct: 434 ILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMIN 493
Query: 140 GLVRGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSG 15
G GY++E + F ++ ++ DS TF L AC+ +G
Sbjct: 494 GYAEHGYSREVIDLFEKI-PRVGLRPDSVTFIGVLSACSHAG 534
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/102 (31%), Positives = 52/102 (50%)
Frame = -3
Query: 308 GRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLVR 129
G +H + G S+ V ++++ MY KCG+++ +F EM R++VSW+ II G +
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ 396
Query: 128 GGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
GG+ EA S M + + AS L AC + L +
Sbjct: 397 GGHVSEAFELLSWM-RMEGPKPTEFALASVLSACGNMAILEH 437
>emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 160 bits (406), Expect = 8e-38
Identities = 81/103 (78%), Positives = 88/103 (85%)
Frame = -3
Query: 311 HGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLV 132
+G L+HGY+VKTG VNSVFVGSALLDMYTK G++ G RVF EMP RNVVSWTAIITGLV
Sbjct: 134 YGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193
Query: 131 RGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
R GYNKEAL+YFSEMW S V+ DSYTFA ALKACADSG LNY
Sbjct: 194 RAGYNKEALVYFSEMWRSR-VEYDSYTFAIALKACADSGALNY 235
Score = 85.1 bits (209), Expect = 5e-15
Identities = 46/108 (42%), Positives = 65/108 (60%)
Frame = -3
Query: 326 SDLLLHGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAI 147
S L +GR IH ++K GF S FV + L MY KCG++ G +F++M R+VVSWT I
Sbjct: 230 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 289
Query: 146 ITGLVRGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
IT LV+ G + A+ F M E SDV + YTFA+ + CA+ + +
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRE-SDVSPNEYTFAAVISGCANLARIEW 336
Score = 77.4 bits (189), Expect = 1e-12
Identities = 37/102 (36%), Positives = 59/102 (57%)
Frame = -3
Query: 320 LLLHGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIIT 141
+L HG+ +H Y + G ++ V SAL++MY KCG + R+FD ++VSWTA+I
Sbjct: 434 ILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMIN 493
Query: 140 GLVRGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSG 15
G GY++E + F ++ ++ DS TF L AC+ +G
Sbjct: 494 GYAEHGYSREVIDLFEKI-PRVGLRPDSVTFIGVLSACSHAG 534
Score = 61.2 bits (147), Expect = 8e-08
Identities = 32/102 (31%), Positives = 52/102 (50%)
Frame = -3
Query: 308 GRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLVR 129
G +H + G S+ V ++++ MY KCG+++ +F EM R++VSW+ II G +
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQ 396
Query: 128 GGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
GG+ EA S M + + AS L AC + L +
Sbjct: 397 GGHVSEAFELLSWM-RMEGPKPTEFALASVLSACGNMAILEH 437
>ref|XP_002310258.1| predicted protein [Populus trichocarpa] gi|222853161|gb|EEE90708.1|
predicted protein [Populus trichocarpa]
Length = 666
Score = 154 bits (390), Expect = 6e-36
Identities = 77/102 (75%), Positives = 83/102 (81%)
Frame = -3
Query: 308 GRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLVR 129
G +HGYSVKT FVNSVFVGSAL+DMY K G+V GC VF EMP RNVVSWTAII GLVR
Sbjct: 87 GESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVR 146
Query: 128 GGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
GYNKEAL YFS+MW V CD+YTF+SALKACADSG LNY
Sbjct: 147 AGYNKEALAYFSDMW-IQKVGCDTYTFSSALKACADSGALNY 187
Score = 82.4 bits (202), Expect = 3e-14
Identities = 43/108 (39%), Positives = 63/108 (58%)
Frame = -3
Query: 326 SDLLLHGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAI 147
S L +GR IH ++K GF FV + L MY KCG++ G R+F+ M +R+VVSWT I
Sbjct: 182 SGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTI 241
Query: 146 ITGLVRGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
I V+ G + A+ F M E +DV + +TFA+ + CA G + +
Sbjct: 242 IMSNVQIGQEENAVKAFRRMRE-TDVSPNEFTFAAVISGCATLGRIEW 288
Score = 77.8 bits (190), Expect = 9e-13
Identities = 37/102 (36%), Positives = 61/102 (59%)
Frame = -3
Query: 320 LLLHGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIIT 141
+L G+ +H + + G + V SAL++MY+KCG + ++FDE N+VSWTA+I
Sbjct: 386 ILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMIN 445
Query: 140 GLVRGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSG 15
G GY++EA+ F ++ ++ DS TF + L AC+ +G
Sbjct: 446 GYAEHGYSQEAIDLFKKL-PKVGLRPDSVTFIAVLAACSHAG 486
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/96 (31%), Positives = 56/96 (58%)
Frame = -3
Query: 308 GRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLVR 129
G +H + ++ G V+S+ V ++++ MY+KC ++ L VF + R+++SW+ +I+G +
Sbjct: 289 GEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQ 348
Query: 128 GGYNKEALMYFSEMWESSDVQCDSYTFASALKACAD 21
GG +EA Y S M + + + FAS L C +
Sbjct: 349 GGCGEEAFDYLSWM-RREGPRPNEFAFASVLSVCGN 383
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = -3
Query: 242 LLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLVRGGYNKEALMYFSEMWESSDVQC 63
+L K G ++ ++FD+M +R+ +SWT II+G V G EAL FS+MW +
Sbjct: 7 VLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHM 66
Query: 62 DSYTFASALKAC 27
D + + ALKAC
Sbjct: 67 DPFILSLALKAC 78
>ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538315|gb|EEF39922.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 556
Score = 138 bits (347), Expect = 5e-31
Identities = 66/103 (64%), Positives = 81/103 (78%)
Frame = -3
Query: 311 HGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLV 132
+G +HGYSVK+ FV+SVFVGSAL+DMY K ++ GC++F MP RNVVSWTAIITG V
Sbjct: 133 YGESLHGYSVKSDFVDSVFVGSALVDMYMKFDKIQQGCQIFHAMPIRNVVSWTAIITGFV 192
Query: 131 RGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
GY+KE L+YFS+MW S V CDSYTFA ALKACA+ G L++
Sbjct: 193 HAGYSKEGLVYFSQMWRSK-VVCDSYTFAIALKACANLGALDH 234
Score = 80.5 bits (197), Expect = 1e-13
Identities = 42/103 (40%), Positives = 58/103 (56%)
Frame = -3
Query: 311 HGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLV 132
HGR IH ++K S FV + L MY KCG++ G R+F++M RNVVSWT IIT
Sbjct: 234 HGRQIHCQALKRSLEASSFVANTLATMYNKCGKLDYGSRLFEKMTIRNVVSWTMIITTYT 293
Query: 131 RGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSGNLNY 3
+ G + AL F M E V + +TFA+ + CA+ G +
Sbjct: 294 QSGQEENALRAFIRMQEIG-VSPNDFTFAAVISGCANLGKTEW 335
Score = 71.2 bits (173), Expect = 8e-11
Identities = 33/102 (32%), Positives = 58/102 (56%)
Frame = -3
Query: 320 LLLHGRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIIT 141
+L G+ +H +++ G + + SAL++MY+KCG + ++FDE ++VSWTA+I
Sbjct: 433 ILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSIKEASKIFDEAENNDIVSWTAMIN 492
Query: 140 GLVRGGYNKEALMYFSEMWESSDVQCDSYTFASALKACADSG 15
G G +EA+ F ++ ++ D TF L AC+ +G
Sbjct: 493 GYAEHGCRQEAIDLFEKI-PRIGLKPDPVTFIGVLTACSHAG 533
Score = 64.7 bits (156), Expect = 8e-09
Identities = 32/96 (33%), Positives = 53/96 (55%)
Frame = -3
Query: 308 GRLIHGYSVKTGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLVR 129
G +HG+ + G + + V ++++ +Y+KCG++ VF E+ R+VVSW+ II G +
Sbjct: 336 GEQLHGHMLCLGLMTFLSVANSVITLYSKCGQLKSASMVFKELTRRDVVSWSTIIAGYSQ 395
Query: 128 GGYNKEALMYFSEMWESSDVQCDSYTFASALKACAD 21
GG +EA Y S M + + T AS L C +
Sbjct: 396 GGCAEEAFEYLSRM-RREGPKPNELTLASVLSVCGN 430
Score = 58.2 bits (139), Expect = 7e-07
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = -3
Query: 278 TGFVNSVFVGSALLDMYTKCGRVSLGCRVFDEMPERNVVSWTAIITGLVRGGYNKEALMY 99
+ +N + + S L + K G + ++FDEMP R+ +SWT II+G V EAL
Sbjct: 43 SNLINMLEINSKLKAL-VKTGCLQDARQMFDEMPHRDEISWTTIISGYVNAIDTTEALTL 101
Query: 98 FSEMWESSDVQCDSYTFASALKACADSGNLNY 3
FS+MW ++ D + + ALK C S N +Y
Sbjct: 102 FSKMWVVPGLRMDPFILSLALKICGLSLNESY 133