BLASTX nr result

ID: Cimicifuga21_contig00038992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038992
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23704.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/...   144   1e-32
ref|XP_003535288.1| PREDICTED: probable actin-related protein 2/...   133   3e-29
ref|XP_002311692.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002881280.1| hypothetical protein ARALYDRAFT_482281 [Arab...   124   1e-26

>emb|CBI23704.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  146 bits (369), Expect = 2e-33
 Identities = 80/146 (54%), Positives = 99/146 (67%)
 Frame = -3

Query: 589 ESFEDLSTNGGFVSFDIFSHHIEGSKLDKTVWNLLNFCVYVKHHVKCTRGFILRRMRKKV 410
           E FEDLSTNGGFVSFDIFSHH+EG +LDKTVW+LLNF  YVK+HVKCTRGFI RRM+ ++
Sbjct: 223 ELFEDLSTNGGFVSFDIFSHHVEGKQLDKTVWSLLNFYAYVKYHVKCTRGFIQRRMKNRL 282

Query: 409 ESLSEILQKAMVTGDEQINKKPQGNXXXXXXXXXXXXXXXRGKCSSLIKKIKTIHLRIRI 230
           ESL E+LQ A +  +E I +K +G                  +C    KKI++    I+I
Sbjct: 283 ESLVEVLQNASMEEEEHI-QKVEGCRCVRKLVSLSRSKVLNRRC-HFTKKIRS---PIKI 337

Query: 229 QGFDRFRRKWLKVPKFYSLRSYAKLD 152
            GF RFR++WL +PKF SL  Y KLD
Sbjct: 338 HGFSRFRQQWLTMPKF-SLIKYTKLD 362


>ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/3 complex subunit
           2-like [Vitis vinifera]
          Length = 368

 Score =  144 bits (362), Expect = 1e-32
 Identities = 80/151 (52%), Positives = 97/151 (64%), Gaps = 5/151 (3%)
 Frame = -3

Query: 589 ESFEDLSTNGGFVSFDIFSHHIEGSKLDKTVWNLLNFCVYVKHHVKCTRGFILRRMRKKV 410
           E FEDLSTNGGFVSFDIFSHH+EG +LDKTVW+LLNF  YVK+HVKCTRGFI RRM+ ++
Sbjct: 223 ELFEDLSTNGGFVSFDIFSHHVEGKQLDKTVWSLLNFYAYVKYHVKCTRGFIQRRMKNRL 282

Query: 409 ESLSEILQKAMVTGDEQINK-----KPQGNXXXXXXXXXXXXXXXRGKCSSLIKKIKTIH 245
           ESL E+LQ A +  +E I K        G                  +C    KKI++  
Sbjct: 283 ESLVEVLQNASMEEEEHIQKVEGKWSDAGCRCVRKLVSLSRSKVLNRRC-HFTKKIRS-- 339

Query: 244 LRIRIQGFDRFRRKWLKVPKFYSLRSYAKLD 152
             I+I GF RFR++WL +PKF SL  Y KLD
Sbjct: 340 -PIKIHGFSRFRQQWLTMPKF-SLIKYTKLD 368


>ref|XP_003535288.1| PREDICTED: probable actin-related protein 2/3 complex subunit
           2-like [Glycine max]
          Length = 368

 Score =  133 bits (334), Expect = 3e-29
 Identities = 67/136 (49%), Positives = 91/136 (66%)
 Frame = -3

Query: 589 ESFEDLSTNGGFVSFDIFSHHIEGSKLDKTVWNLLNFCVYVKHHVKCTRGFILRRMRKKV 410
           E+FEDLSTNGGF +FDI S H+EG++LDKTVWNLLNF  YV++HVK T+GFI RRMRK++
Sbjct: 222 EAFEDLSTNGGFFTFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRL 281

Query: 409 ESLSEILQKAMVTGDEQINKKPQGNXXXXXXXXXXXXXXXRGKCSSLIKKIKTIHLRIRI 230
           ESL E+L +  +  +EQ  K+ Q                 + +  +  +KIK I  R++I
Sbjct: 282 ESLVEVLHQTNLEENEQ-TKQHQVYRYTKKLVRSAKYAVLKQRWGTFGRKIKRIRFRLKI 340

Query: 229 QGFDRFRRKWLKVPKF 182
            GF RFR++W + PKF
Sbjct: 341 HGFTRFRQQWFRFPKF 356


>ref|XP_002311692.1| predicted protein [Populus trichocarpa] gi|222851512|gb|EEE89059.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  132 bits (333), Expect = 3e-29
 Identities = 72/146 (49%), Positives = 89/146 (60%)
 Frame = -3

Query: 589 ESFEDLSTNGGFVSFDIFSHHIEGSKLDKTVWNLLNFCVYVKHHVKCTRGFILRRMRKKV 410
           E  EDLSTNGGFV+FDI S H+EG KLDKTVW+LLNF  YVK HVK TRGFI RRM+K++
Sbjct: 223 EPLEDLSTNGGFVTFDISSRHVEGKKLDKTVWSLLNFYAYVKKHVKGTRGFIQRRMQKRL 282

Query: 409 ESLSEILQKAMVTGDEQINKKPQGNXXXXXXXXXXXXXXXRGKCSSLIKKIKTIHLRIRI 230
           E+ +E      + G      KP+                 + +C  L +KI  IH RI+I
Sbjct: 283 ETHAECRYVGKLVG----LSKPKN---------------FKRRCRDLTRKIMQIHFRIKI 323

Query: 229 QGFDRFRRKWLKVPKFYSLRSYAKLD 152
            GF RF R+WL +PKF S   Y KL+
Sbjct: 324 HGFRRFHRRWLTIPKFSSPLRYTKLE 349


>ref|XP_002881280.1| hypothetical protein ARALYDRAFT_482281 [Arabidopsis lyrata subsp.
           lyrata] gi|297327119|gb|EFH57539.1| hypothetical protein
           ARALYDRAFT_482281 [Arabidopsis lyrata subsp. lyrata]
          Length = 370

 Score =  124 bits (311), Expect = 1e-26
 Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
 Frame = -3

Query: 589 ESFEDLSTNGGFVSFDIFSHHIEGSKLDKTVWNLLNFCVYVKHHVKCTRGFILRRMRKKV 410
           E  +DL+TN GFVSFDI S H+EG +LDKTVWNLLNF  YVK+H+KC+RG+I RRMRK++
Sbjct: 220 EPVQDLTTNSGFVSFDITSRHVEGKRLDKTVWNLLNFYAYVKYHIKCSRGYIQRRMRKRM 279

Query: 409 ESLSEILQKAMVTGDEQINKKPQGNXXXXXXXXXXXXXXXRGKCSSLIKKIKTIHLRIRI 230
           +SL ++L    +  +   N+  +                 + +C  + +++K    RI+I
Sbjct: 280 DSLVKLLNNTNLEEEAAQNENGRCKYVKEFVKVPKGKMMMKQRCKEMTRRVKISKFRIKI 339

Query: 229 QGFD--RFRRKWLKVPKFYSL---RSYAKLD 152
            G    RF ++W+  PKF S    +SY KLD
Sbjct: 340 NGCARLRFNQRWISFPKFSSKPSNKSYTKLD 370


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