BLASTX nr result

ID: Cimicifuga21_contig00038979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00038979
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
emb|CBI20738.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_003603234.1| Pentatricopeptide repeat-containing protein ...   155   3e-36
emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]   155   3e-36
ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  155 bits (392), Expect = 3e-36
 Identities = 71/113 (62%), Positives = 91/113 (80%)
 Frame = -1

Query: 339  EALKFFREMRTQGVEPDKVTFIGVLSACSHSGLVSEAYGYFDSMSEVYGIEPEIEHYACL 160
            EA+  F+ M++ G+EPD+V+FIG+LSACSH+GL SEAY Y  SM   YGIEPEIEHY+CL
Sbjct: 1292 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCL 1351

Query: 159  VDVLSRAGLVDKAEKLIERMPFTPSASMCRAILGACRVHGNVEIGEHIAGRIF 1
            VD L RAGLV +A+K+IE MPF  SAS+ RA+LGACR+ G+VE G+ +A R+F
Sbjct: 1352 VDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF 1404


>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  155 bits (392), Expect = 3e-36
 Identities = 71/113 (62%), Positives = 91/113 (80%)
 Frame = -1

Query: 339 EALKFFREMRTQGVEPDKVTFIGVLSACSHSGLVSEAYGYFDSMSEVYGIEPEIEHYACL 160
           EA+  F+ M++ G+EPD+V+FIG+LSACSH+GL SEAY Y  SM   YGIEPEIEHY+CL
Sbjct: 577 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCL 636

Query: 159 VDVLSRAGLVDKAEKLIERMPFTPSASMCRAILGACRVHGNVEIGEHIAGRIF 1
           VD L RAGLV +A+K+IE MPF  SAS+ RA+LGACR+ G+VE G+ +A R+F
Sbjct: 637 VDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF 689


>ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355492282|gb|AES73485.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/113 (63%), Positives = 90/113 (79%)
 Frame = -1

Query: 339  EALKFFREMRTQGVEPDKVTFIGVLSACSHSGLVSEAYGYFDSMSEVYGIEPEIEHYACL 160
            EAL FF EM+++GV PD+VTFIGVLSACSHSGL S+AY  FDSM + YG+EPEIEHY+CL
Sbjct: 685  EALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCL 744

Query: 159  VDVLSRAGLVDKAEKLIERMPFTPSASMCRAILGACRVHGNVEIGEHIAGRIF 1
            VD LSRAG + +AEK++  MPF  SA+M R +L ACRV G+ E GE +A ++F
Sbjct: 745  VDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLF 797


>emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  155 bits (392), Expect = 3e-36
 Identities = 71/113 (62%), Positives = 91/113 (80%)
 Frame = -1

Query: 339 EALKFFREMRTQGVEPDKVTFIGVLSACSHSGLVSEAYGYFDSMSEVYGIEPEIEHYACL 160
           EA+  F+ M++ G+EPD+V+FIG+LSACSH+GL SEAY Y  SM   YGIEPEIEHY+CL
Sbjct: 215 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCL 274

Query: 159 VDVLSRAGLVDKAEKLIERMPFTPSASMCRAILGACRVHGNVEIGEHIAGRIF 1
           VD L RAGLV +A+K+IE MPF  SAS+ RA+LGACR+ G+VE G+ +A R+F
Sbjct: 275 VDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVEXGKRVAARLF 327


>ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  150 bits (378), Expect = 1e-34
 Identities = 73/112 (65%), Positives = 90/112 (80%)
 Frame = -1

Query: 339  EALKFFREMRTQGVEPDKVTFIGVLSACSHSGLVSEAYGYFDSMSEVYGIEPEIEHYACL 160
            EAL+FF EM+++GV PD+VTFIGVLSACSHSGLVSEAY  F SM ++YGIEPEIEHY+CL
Sbjct: 1294 EALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCL 1353

Query: 159  VDVLSRAGLVDKAEKLIERMPFTPSASMCRAILGACRVHGNVEIGEHIAGRI 4
            VD LSRAG + +AEK+I  MPF  SASM R +L ACRV  + E G+ +A ++
Sbjct: 1354 VDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKL 1405


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